| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0804 |
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| Symbol | sdhB |
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| ID | 3933247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 765756 |
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| End bp | 766550 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903151 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_508746 |
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| Protein GI | 89053295 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.935221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAC TCGCCCTCCC CAAGAACTCC CGCATCACGC GCGGCAAGAC CTGGCCCAAG
CCCGACGGGG CCACCAACCT GCGCAAGTTC CAGATCTACC GCTGGAACCC CGACGACGGC
AAAAACCCAT CGCTGGACAC CTATTGGGTC GACATGGACA CCTGCGGGCC GATGGTTCTG
GACGCGCTGA TCAAGATCAA GAACGAGATT GATCCCACCC TCACCTTCCG CCGCTCCTGC
CGCGAAGGCA TCTGCGGGTC CTGCGCGATG AATATCGGCG GCGTGAAATC CAAGGGCACG
AACACACTGG CCTGCATCTA CGGCATGGAC GAAGTGCAGG GCGACATCGC GATTTACCCC
CTGCCCCACA TGCCCGTCGT CAAGGACCTG ATCCCGGACC TGACCCATTT CTACGCGCAA
CATGCCTCCA TCATGCCGTG GCTGGAAACC AAGACCCGTC GCCCTGAAAA GGAATGGCGT
CAGTCGGTGG AAGATCGCGA AAAGCTCGAC GGCCTCTACG AATGCGTCAT GTGTGCCTGC
TGCTCGACCT CCTGCCCGTC CTACTGGTGG AACGGCGACC GCTATCTTGG GCCCGCCGCC
CTGCTGCATG CCTACCGCTG GATCATCGAC AGCCGTGACG AGAATACGGG CGAGCGCCTG
GACGAGTTGG AAGACCCCTT CAAGCTCTAC CGCTGCCACA CGATCATGAA TTGCACGAAG
ACCTGCCCCA AAGGCCTGAA CCCAGCCAAG GCGATCTCGT CGATCAAGAA AATGATGGTC
GAACGGACGC ACTGA
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| Protein sequence | MVELALPKNS RITRGKTWPK PDGATNLRKF QIYRWNPDDG KNPSLDTYWV DMDTCGPMVL
DALIKIKNEI DPTLTFRRSC REGICGSCAM NIGGVKSKGT NTLACIYGMD EVQGDIAIYP
LPHMPVVKDL IPDLTHFYAQ HASIMPWLET KTRRPEKEWR QSVEDREKLD GLYECVMCAC
CSTSCPSYWW NGDRYLGPAA LLHAYRWIID SRDENTGERL DELEDPFKLY RCHTIMNCTK
TCPKGLNPAK AISSIKKMMV ERTH
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