Gene Jann_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0737 
Symbol 
ID3933180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp707407 
End bp708420 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID637903084 
Productcytochrome bd ubiquinol oxidase, subunit II 
Protein accessionYP_508679 
Protein GI89053228 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCCG ATTTCGCAAA CCCGGCCGAA TGGCTGCCTT GGGCCTTCGC GTCGCTGATG 
GGGTTCTCGA TCCTCGTCTA CGTTGTGTTG GACGGCTTCG ATCTGGGTGT CGGCATCCTC
TTTCCGTTCG CAGAGGATGC CGAAAAGGAC CGGATGATCG GCTCCATCGG CCCGTTCTGG
GATGCCAACG AGACGTGGCT GGTGCTGGCG GTGGGGCTGC TTCTGGTGGC GTTCCCCTCC
GCCCACGGGT TGATTCTGAC GACATTGTAT CTGCCGGTTT TCATCATGCT CATTGGGTTG
ATCTTGCGTG GTGTGGCGTT TGAGTTCCGG GCCAAGGCCC ACGCCAAGCA CAAAAAACTG
TGGAACAACT TGTTCTTCGT GGGCTCCACC ATGACCGCGC TGAGCCAGGG TTTCATGCTG
GGTCTCTACA TCATGGGGTT GGAGCAGACC TGGGCGACAT ATGCCTTTGC GGCGTTGACG
GCGGTGTTCC TGACGGTGGG TTACAGCTTC ATCGGAGCTG CATGGTTGAT CCACAAGACC
GAGGGGGCGT TACAGCTGAA ATCCGTGCAA TGGGCGCGGG AGAGCCTTTG GGGCGTGATC
CTTGGCATCG GGGCGGTGTC TCTGGCCACG CCGCTGGTCT CCACCCGGAT CTTTGATCGC
TGGTTGCAGT TCCCCGAAGC GCTTTGGCTC GCGCCGATCC CGGTTATCTC AGGCCTGATG
GTCCTGTGGC TGTGGCGCAT GGTGCGGGTC ATGCCTTACG CAGGCGATGT GCGATCCTGG
CTGCCCTTCG CGGTGGCGAC GGGCCTGTTT TCGTTGGCGT ATGTGGGGAT GGCGTACAGC
TTCTACCCTT ATGTGGTGCC GGAGCGGTTG ACGATCTACG AGGCCGCGGC AGCGCCTGAG
AGTTTGCTGA TCATCCTCGT GGGGGCCTGT TTTGTGGTGC CGGTGATCGC CGGATACTCA
ATTCTTGCCT ACACCATCTT TCGCGGTAAG GCGACGGAGC TGCGCTACGA CTGA
 
Protein sequence
MFPDFANPAE WLPWAFASLM GFSILVYVVL DGFDLGVGIL FPFAEDAEKD RMIGSIGPFW 
DANETWLVLA VGLLLVAFPS AHGLILTTLY LPVFIMLIGL ILRGVAFEFR AKAHAKHKKL
WNNLFFVGST MTALSQGFML GLYIMGLEQT WATYAFAALT AVFLTVGYSF IGAAWLIHKT
EGALQLKSVQ WARESLWGVI LGIGAVSLAT PLVSTRIFDR WLQFPEALWL APIPVISGLM
VLWLWRMVRV MPYAGDVRSW LPFAVATGLF SLAYVGMAYS FYPYVVPERL TIYEAAAAPE
SLLIILVGAC FVVPVIAGYS ILAYTIFRGK ATELRYD