| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0638 |
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| Symbol | |
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| ID | 3933080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 610827 |
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| End bp | 612371 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637902984 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_508580 |
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| Protein GI | 89053129 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.8536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAA TACGGACAGA CCATGAAGAT CGCGGGCGGC TGGGCGTTTT GGCGCGAAGG
ATCCGCATGG CGCTGGGCCG GGTAGAGGTG CTGGCCCTGT TCCCACTGAT CGCCATCAGT
GCCACCGCAC TGGGCTTTGA CGATCTGGCC TTGGTCACCG CCATCGGCCT TTCGGCGCTT
CTGGCCATTG GCGGGGTCGG TGCGCGGGCA GCCCAGCCTG TCGCGACGTC CGACAGACCA
ACGGCCAACG GACGCGGCGC GCTTGTTGCC ATGCTGGACC GCGTGGCAGA TCTGCCCGGC
CGCGATACCG CCTGCATCCT GTTGCAGATT GATGACTGGG CCTTGCTGCA CGATAGATGG
GGCCACGACA CCCGCGAAGA TCTGGCAGCC CGCGTGGAGG ATCGTCTTCA GACCGCTTTG
CGCAACGGCG ATCTGCTGAC CCGTCTGGGC GATGCACGCT TCGGCATCGT GCTGTCGCCC
TTGCCGTCGG CGCGTCTGGG CCTGCGCGAC ACGATCACGA CCCGATTGGC GGACGCCGTT
GCCGATCCGC TGCCCATGCG CGGCACCGCC CTGCGCCTGA CGGCGTCGAT CGGGCATTCG
GCGATGATCA AACAGGGCGT CGATCCCGCT GACACGACAT TCAAGGCCGC AGAGGCCGCG
CTGGGGGAGG CGACGGCCAA CGGCCCCGGT ACGATCCGCG CTTACGCTCC GGGCATGGGT
CGTGCCCGCG CCTTGCAGTC CAGCCTGAGC GAGGAGGTTG AGGCCGCAAT CCACGACGGC
GCGATCACCG CCTGGTTTCA GCCGCAAATC CACGCGCGGA CCGGCACCCT TGCCGGGATG
GAGACATTGG CCCGTTGGCA GCACCCCAAC CACGGCGTCC TTGGCCCGAA AGAGTTCTTT
TCGGCGGTGG AGGCCTCGGG TCACATGCCG CTGCTGGGTC AAACCTTGCT GCATCAGGCG
CTGAAGGCGT TACAGGACTG GGATGCGATG AGCGCCCATA TCCCGCTGAT CACGATCAAC
TTTTCCGCGA CCGAATTGCG CGATCAGAAT CTGGCGGCCA CCCTCGCCAG CGAAGTCGCG
CGCTACGGCC TTGCGCCGGA GCGGGTCGTT GTCGAAATCT CCGAAACCGT CGCCACCCAG
GTCGAGGACG ACGCAATCGT CGCAACGTTG CAGGCGATGC GACATGCAGG TCACAGGCTG
GATCTGGACG GGTTCGGCCT GGGCGCTGCA TCCTTGCCCA CGCTACAGCG CTTCGCCGTG
AGCCGGGTCA AGATCGACCG CAGCTTTGTG CTCGACATCG ACCTTGACCA CGGCAAACGT
CAAAGCGTCA CCGCGATCGT GGCAATGGCG AAGGCCATGG GGATTGAAAC CATCGCCAAC
GGCGTTGAAA CGCAGACCGA GCAGGATGCG CTGCTCGCGC TTGGATGCGA CTATCTGCAG
GGATTCGGCG TGGCGCGCCC GATGGGGTTG GACAACGTTG CAGACTGGGC CCGCGCCCAC
GGTGCCGCGG GGAAAACCAT TCGCCTGGAT GATCGACGCG CCTGA
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| Protein sequence | MARIRTDHED RGRLGVLARR IRMALGRVEV LALFPLIAIS ATALGFDDLA LVTAIGLSAL
LAIGGVGARA AQPVATSDRP TANGRGALVA MLDRVADLPG RDTACILLQI DDWALLHDRW
GHDTREDLAA RVEDRLQTAL RNGDLLTRLG DARFGIVLSP LPSARLGLRD TITTRLADAV
ADPLPMRGTA LRLTASIGHS AMIKQGVDPA DTTFKAAEAA LGEATANGPG TIRAYAPGMG
RARALQSSLS EEVEAAIHDG AITAWFQPQI HARTGTLAGM ETLARWQHPN HGVLGPKEFF
SAVEASGHMP LLGQTLLHQA LKALQDWDAM SAHIPLITIN FSATELRDQN LAATLASEVA
RYGLAPERVV VEISETVATQ VEDDAIVATL QAMRHAGHRL DLDGFGLGAA SLPTLQRFAV
SRVKIDRSFV LDIDLDHGKR QSVTAIVAMA KAMGIETIAN GVETQTEQDA LLALGCDYLQ
GFGVARPMGL DNVADWARAH GAAGKTIRLD DRRA
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