Gene Jann_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0630 
Symbol 
ID3933072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp603243 
End bp604034 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID637902976 
ProductABC transporter related 
Protein accessionYP_508572 
Protein GI89053121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA CTGCAGAAGA TCGTGCGATC GACCGCTCTC AAATGAAGGT CTCCGATGAG 
GTCGCGATTG AGATTGACGG GATGAACAAG TGGTACGGCA CCTTCCACGT GCTGCGCGAC
ATCAACCTGA CCGTGAACCA GGGGGAGCGG ATCGTGATCT GCGGCCCCTC GGGCTCGGGC
AAATCGACGC TGATCCGGTG CATCAATGCG CTGGAAGAGC ATCAGCAAGG CTCCATCGTC
GTGGACGGCA CGCTGTTGTC CAACGACCTC AAGAACATCG ACAAGATCCG GTCGGAGGTG
GGCATGTGCT TCCAGCACTT CAACCTGTTT CCGCATCTGA CGATCCTTGA GAATTGTACG
CTGGCGCCGA TCTGGGTGCG CAAAACGCCC AAGAAGGAAG CCGAGGAAAC GGCGATGCAT
TTCCTGGAGA AGGTGAAGAT CCCCGAGCAG GCCGACAAAT ATCCCGGCCA GCTTTCGGGC
GGTCAGCAGC AGCGCGTCGC CATCGCGCGG TCGCTCTGCA TGCGGCCCCG GATCATGCTG
TTCGATGAGC CGACCTCGGC GCTGGACCCC GAGATGATCA AGGAAGTGCT CGACACGATG
ATCGAGTTGG CGGAGGAGGG CATGACCATG CTCTGCGTGA CCCACGAGAT GGGCTTTGCC
CGTCAGGTTG CCAACCGTGT GATCTTCATG GATGCAGGTC AGATCGTGGA GCAGAACGAG
CCGGAGGAGT TCTTCACGAA CCCCAAATCC GAGCGGACGC AGCTGTTCCT GAGCCAGATC
CTGGGGCACT AG
 
Protein sequence
MANTAEDRAI DRSQMKVSDE VAIEIDGMNK WYGTFHVLRD INLTVNQGER IVICGPSGSG 
KSTLIRCINA LEEHQQGSIV VDGTLLSNDL KNIDKIRSEV GMCFQHFNLF PHLTILENCT
LAPIWVRKTP KKEAEETAMH FLEKVKIPEQ ADKYPGQLSG GQQQRVAIAR SLCMRPRIML
FDEPTSALDP EMIKEVLDTM IELAEEGMTM LCVTHEMGFA RQVANRVIFM DAGQIVEQNE
PEEFFTNPKS ERTQLFLSQI LGH