Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0630 |
Symbol | |
ID | 3933072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 603243 |
End bp | 604034 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637902976 |
Product | ABC transporter related |
Protein accession | YP_508572 |
Protein GI | 89053121 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACA CTGCAGAAGA TCGTGCGATC GACCGCTCTC AAATGAAGGT CTCCGATGAG GTCGCGATTG AGATTGACGG GATGAACAAG TGGTACGGCA CCTTCCACGT GCTGCGCGAC ATCAACCTGA CCGTGAACCA GGGGGAGCGG ATCGTGATCT GCGGCCCCTC GGGCTCGGGC AAATCGACGC TGATCCGGTG CATCAATGCG CTGGAAGAGC ATCAGCAAGG CTCCATCGTC GTGGACGGCA CGCTGTTGTC CAACGACCTC AAGAACATCG ACAAGATCCG GTCGGAGGTG GGCATGTGCT TCCAGCACTT CAACCTGTTT CCGCATCTGA CGATCCTTGA GAATTGTACG CTGGCGCCGA TCTGGGTGCG CAAAACGCCC AAGAAGGAAG CCGAGGAAAC GGCGATGCAT TTCCTGGAGA AGGTGAAGAT CCCCGAGCAG GCCGACAAAT ATCCCGGCCA GCTTTCGGGC GGTCAGCAGC AGCGCGTCGC CATCGCGCGG TCGCTCTGCA TGCGGCCCCG GATCATGCTG TTCGATGAGC CGACCTCGGC GCTGGACCCC GAGATGATCA AGGAAGTGCT CGACACGATG ATCGAGTTGG CGGAGGAGGG CATGACCATG CTCTGCGTGA CCCACGAGAT GGGCTTTGCC CGTCAGGTTG CCAACCGTGT GATCTTCATG GATGCAGGTC AGATCGTGGA GCAGAACGAG CCGGAGGAGT TCTTCACGAA CCCCAAATCC GAGCGGACGC AGCTGTTCCT GAGCCAGATC CTGGGGCACT AG
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Protein sequence | MANTAEDRAI DRSQMKVSDE VAIEIDGMNK WYGTFHVLRD INLTVNQGER IVICGPSGSG KSTLIRCINA LEEHQQGSIV VDGTLLSNDL KNIDKIRSEV GMCFQHFNLF PHLTILENCT LAPIWVRKTP KKEAEETAMH FLEKVKIPEQ ADKYPGQLSG GQQQRVAIAR SLCMRPRIML FDEPTSALDP EMIKEVLDTM IELAEEGMTM LCVTHEMGFA RQVANRVIFM DAGQIVEQNE PEEFFTNPKS ERTQLFLSQI LGH
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