| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0608 |
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| Symbol | rpsE |
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| ID | 3933050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 584867 |
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| End bp | 585460 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902954 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_508550 |
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| Protein GI | 89053099 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.424866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAC GTGAGAACCG GGGACGTGGC CGTGGCCGCA ACCGCGAAGA AGAAACACCG
GAATTTGCAG ACCGTCTGGT CGCGATCAAC CGTGTGTCCA AGACCGTCAA GGGCGGTAAG
CGCTTTGGGT TCGCAGCCCT CGTGGTTGTG GGCGATCAGC GCGGCCGTGT GGGATTTGGC
AAAGGTAAAG CCAAAGAGGT GCCCGAGGCG ATCCGCAAGG CGACCGAGCA GGCCAAGCGC
CAGCTGATCC GCGTGCCGCT GAAAGAAGGC CGCACGTTGC ACCACGACGT CAAAGGTCAC
CACGGCGCTG GCAAAGTCGT GATGCGCACC GCGCCGGAAG GGACCGGGAT CATCGCCGGT
GGTCCGATGC GTGCCGTGTT CGAGATGTTG GGCGTGAAGG ACGTTGTGTC GAAGTCGACC
GGTTCCCAGA ACCCCTACAA CATGATCCGC GCTACGCTGG ACGGTCTGCG CAACGAGTCG
AGCCCCCGCC AGGTGGCCTC GCGTCGCGGT AAGAAAGTCG CCGACATTCT GCCCAAGCGC
GACGATCATC CCCAGATCGA CGGCGAGCAA GCGCCCGTTT CCGAGGAGGC CTGA
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| Protein sequence | MAERENRGRG RGRNREEETP EFADRLVAIN RVSKTVKGGK RFGFAALVVV GDQRGRVGFG
KGKAKEVPEA IRKATEQAKR QLIRVPLKEG RTLHHDVKGH HGAGKVVMRT APEGTGIIAG
GPMRAVFEML GVKDVVSKST GSQNPYNMIR ATLDGLRNES SPRQVASRRG KKVADILPKR
DDHPQIDGEQ APVSEEA
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