Gene Jann_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0576 
Symbol 
ID3933018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp564886 
End bp565356 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637902922 
Product30S ribosomal protein S7 
Protein accessionYP_508518 
Protein GI89053067 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.688542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTC GTCACGCCGC CGAAAAACGC CAGGTCCTGC CCGACGCCAA GTTTGGCGAT 
ATGGTCCTGA CCAAATTCAT GAACAACCTG ATGATCGACG GCAAGAAAGC CGTTGCCGAG
CGGATTGTTT ACAACGCCTT TGACCGGGTC GAAGGCAAGC TGAAGCGCGC GCCTGTGGAA
GTCTTCCACG AAGCGCTTGA GAACATCAAA CCCGCCGTGG AAGTTCGCTC CCGCCGCGTG
GGTGGCGCCA CCTACCAGGT GCCCGTCGAT GTGCGCCCCG AGCGTCGCGA AGCGCTGGCC
ATTCGTTGGC TGATCAATGC CTCGCGCGCC CGCAACGAGA ACACCATGGA AGAGCGTCTG
GCCGGTGAGC TGGTCGATGC CGTCAACATG CGTGGTTCTG CCGTCAAGAA GCGCGAAGAC
ACTCACAAGA TGGCCGACGC CAACCGCGCG TTCAGCCATT ATCGTTGGTG A
 
Protein sequence
MSRRHAAEKR QVLPDAKFGD MVLTKFMNNL MIDGKKAVAE RIVYNAFDRV EGKLKRAPVE 
VFHEALENIK PAVEVRSRRV GGATYQVPVD VRPERREALA IRWLINASRA RNENTMEERL
AGELVDAVNM RGSAVKKRED THKMADANRA FSHYRW