Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0576 |
Symbol | |
ID | 3933018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 564886 |
End bp | 565356 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637902922 |
Product | 30S ribosomal protein S7 |
Protein accession | YP_508518 |
Protein GI | 89053067 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.688542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGTC GTCACGCCGC CGAAAAACGC CAGGTCCTGC CCGACGCCAA GTTTGGCGAT ATGGTCCTGA CCAAATTCAT GAACAACCTG ATGATCGACG GCAAGAAAGC CGTTGCCGAG CGGATTGTTT ACAACGCCTT TGACCGGGTC GAAGGCAAGC TGAAGCGCGC GCCTGTGGAA GTCTTCCACG AAGCGCTTGA GAACATCAAA CCCGCCGTGG AAGTTCGCTC CCGCCGCGTG GGTGGCGCCA CCTACCAGGT GCCCGTCGAT GTGCGCCCCG AGCGTCGCGA AGCGCTGGCC ATTCGTTGGC TGATCAATGC CTCGCGCGCC CGCAACGAGA ACACCATGGA AGAGCGTCTG GCCGGTGAGC TGGTCGATGC CGTCAACATG CGTGGTTCTG CCGTCAAGAA GCGCGAAGAC ACTCACAAGA TGGCCGACGC CAACCGCGCG TTCAGCCATT ATCGTTGGTG A
|
Protein sequence | MSRRHAAEKR QVLPDAKFGD MVLTKFMNNL MIDGKKAVAE RIVYNAFDRV EGKLKRAPVE VFHEALENIK PAVEVRSRRV GGATYQVPVD VRPERREALA IRWLINASRA RNENTMEERL AGELVDAVNM RGSAVKKRED THKMADANRA FSHYRW
|
| |