Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0574 |
Symbol | |
ID | 3933016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 563416 |
End bp | 564243 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902920 |
Product | hypothetical protein |
Protein accession | YP_508516 |
Protein GI | 89053065 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGG GTGTTCAGGT CCAGGGGTTG TGCCGCTTCT CGTTCCCCTG CACGGGCGGG TTCAAGAAGT ACCACGAGAG CCTGGAAGAG CGGCGCACAG CCTTGTATGC GCCCAAACGT CTTGATGAGA GGACTTTGTG GTTCGAGCAT ATCTTCCTTC CTCCTCTGCA CGCGCAGACG GACGACGATT TCTCCCTGCA TCTGCTGTTG GGGGAAGACC TGCCCGACCC GTGGCGATCC CGGGTGGAAA CCGCGATTAA AGACATCCCC CAGATCACCC CCCATTGGCG CGCGCCGGGT GATCATCGGG CGATTTGCCG GGACGTGATG TGGGGCGGGC GCGATGGCAG CCGCGCCACG GTGGCGGAGT TTCGGCTGGA TGACGATGAC GCAGTCGCCG TGGATTATGT CCAGCAGCTG CGGCGCGCCT GGGGCAAGCT TTCGCGGTTG ACGAACACCC ATGGCCGCGT GGCGCTGGAC CATGGCAAGG GCATGGTGCT GGAAGCGCAG CCAGACCGCT CCATCACGCC CCATGTGCTG AATACGCATT GCTGGTCCGC AGGGCTGGCT ATCTATCTTA GGCCCGATGA TGAGGCGATC ATCATGGACT TCCCGCATCA CAAGATCTGG TCCCGCGTGC CGTTCGTGAA CCTGACAGAT TCGGTGATGT TCATTCGCGG TGATCACGCC CATAACGACG CGAAGACGCC CTTCGGCGCG GGCCTGCCCG TCCCGGTGCC CGATGATGAG ATTGCGACTT TGATCCAAAG GCGGTTCGCG ATTGATTTTC CAGCATTCCA AGCGGACTGG CGGACGCGGG GCGGCTAG
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Protein sequence | MAEGVQVQGL CRFSFPCTGG FKKYHESLEE RRTALYAPKR LDERTLWFEH IFLPPLHAQT DDDFSLHLLL GEDLPDPWRS RVETAIKDIP QITPHWRAPG DHRAICRDVM WGGRDGSRAT VAEFRLDDDD AVAVDYVQQL RRAWGKLSRL TNTHGRVALD HGKGMVLEAQ PDRSITPHVL NTHCWSAGLA IYLRPDDEAI IMDFPHHKIW SRVPFVNLTD SVMFIRGDHA HNDAKTPFGA GLPVPVPDDE IATLIQRRFA IDFPAFQADW RTRGG
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