Gene Jann_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0574 
Symbol 
ID3933016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp563416 
End bp564243 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID637902920 
Producthypothetical protein 
Protein accessionYP_508516 
Protein GI89053065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG GTGTTCAGGT CCAGGGGTTG TGCCGCTTCT CGTTCCCCTG CACGGGCGGG 
TTCAAGAAGT ACCACGAGAG CCTGGAAGAG CGGCGCACAG CCTTGTATGC GCCCAAACGT
CTTGATGAGA GGACTTTGTG GTTCGAGCAT ATCTTCCTTC CTCCTCTGCA CGCGCAGACG
GACGACGATT TCTCCCTGCA TCTGCTGTTG GGGGAAGACC TGCCCGACCC GTGGCGATCC
CGGGTGGAAA CCGCGATTAA AGACATCCCC CAGATCACCC CCCATTGGCG CGCGCCGGGT
GATCATCGGG CGATTTGCCG GGACGTGATG TGGGGCGGGC GCGATGGCAG CCGCGCCACG
GTGGCGGAGT TTCGGCTGGA TGACGATGAC GCAGTCGCCG TGGATTATGT CCAGCAGCTG
CGGCGCGCCT GGGGCAAGCT TTCGCGGTTG ACGAACACCC ATGGCCGCGT GGCGCTGGAC
CATGGCAAGG GCATGGTGCT GGAAGCGCAG CCAGACCGCT CCATCACGCC CCATGTGCTG
AATACGCATT GCTGGTCCGC AGGGCTGGCT ATCTATCTTA GGCCCGATGA TGAGGCGATC
ATCATGGACT TCCCGCATCA CAAGATCTGG TCCCGCGTGC CGTTCGTGAA CCTGACAGAT
TCGGTGATGT TCATTCGCGG TGATCACGCC CATAACGACG CGAAGACGCC CTTCGGCGCG
GGCCTGCCCG TCCCGGTGCC CGATGATGAG ATTGCGACTT TGATCCAAAG GCGGTTCGCG
ATTGATTTTC CAGCATTCCA AGCGGACTGG CGGACGCGGG GCGGCTAG
 
Protein sequence
MAEGVQVQGL CRFSFPCTGG FKKYHESLEE RRTALYAPKR LDERTLWFEH IFLPPLHAQT 
DDDFSLHLLL GEDLPDPWRS RVETAIKDIP QITPHWRAPG DHRAICRDVM WGGRDGSRAT
VAEFRLDDDD AVAVDYVQQL RRAWGKLSRL TNTHGRVALD HGKGMVLEAQ PDRSITPHVL
NTHCWSAGLA IYLRPDDEAI IMDFPHHKIW SRVPFVNLTD SVMFIRGDHA HNDAKTPFGA
GLPVPVPDDE IATLIQRRFA IDFPAFQADW RTRGG