| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0564 |
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| Symbol | rplA |
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| ID | 3933006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 549578 |
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| End bp | 550276 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902910 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_508506 |
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| Protein GI | 89053055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAA TGGGAAAACG CTTCGCCGCT GCAAAAGCAG CCGTTGAAGG CAAAGAGAAC
ATCACTGTTG AAGAGGCCGT CGCGCTGCTG AAAGGCAATT CGAAAACCAA ATTCGACGAG
ACGATCGAGA TTGCGATGAA GCTGGGTGTT GACCCCCGCC ACGCCGACCA GATGGTCCGC
GGCACGGTCA ACCTGCCCAA CGGCACCGGC AAGACGGTCC GTGTGGCCGT GTTTGCCCGC
GGCCCCAAGG CGGAAGAAGC CACAGCCGCT GGCGCGGATA TCGTCGGCGC AGAGGATCTG
ATGGAAACCG TCCAGGGCGG CACCATCGAG TTTGATCGCT GCATCGCGAC GCCCGACATG
ATGCCCATCG TGGGTCGTCT GGGTAAGGTG CTTGGTCCCC GCAACCTGAT GCCGAACCCG
AAGATCGGCA CGGTGACGAT GGACGTGAAA GAGGCCGTTG AAGCCGCCAA GGGCGGTCAG
GTCCAGTTCA AGGCCGAAAA GGCTGGCGTG GTTCACGCGG GCGTCGGCAA AGCCTCCTTC
ACCGAAGCGC AGCTGGTCGA GAATGTCCGT GCGTTCGTGG ATGCCGTCTC CAAGGCGAAG
CCGTCGGGGT CCAAAGGCAC TTACATGCAG AAGATCAACC TGACCTCCAC CATGGGTCCG
GGCGTGTCCC TGAGCGTCGA GAACGCAACG GGCAATTGA
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| Protein sequence | MGKMGKRFAA AKAAVEGKEN ITVEEAVALL KGNSKTKFDE TIEIAMKLGV DPRHADQMVR
GTVNLPNGTG KTVRVAVFAR GPKAEEATAA GADIVGAEDL METVQGGTIE FDRCIATPDM
MPIVGRLGKV LGPRNLMPNP KIGTVTMDVK EAVEAAKGGQ VQFKAEKAGV VHAGVGKASF
TEAQLVENVR AFVDAVSKAK PSGSKGTYMQ KINLTSTMGP GVSLSVENAT GN
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