Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0515 |
Symbol | |
ID | 3932956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 509721 |
End bp | 510353 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637902860 |
Product | hypothetical protein |
Protein accession | YP_508457 |
Protein GI | 89053006 |
COG category | [S] Function unknown |
COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAGAC GCCGGGATTA CAGACCGTGG TATCGCATCA TTCTTGAGGT TCTCTGGCCT CGGGGGGGAT GGCTGCGTGC GGCCCAATAC GTCCAGCACC GGATGCGCCG CCTGCCTGGA ACGCCGGAGC AGATCGCGCG CGGGGTCTTT GCCGGGGCCG TGACGGTCTT CACCCCCTAC TTCGGCCTGC ACTTCGTGAT CGCGGCCCTG TTGGCGCGGG CGATGCGCGG GTCGATCTTC GCCGCCCTGT TGGCGACGTT CATCGGCAAC CCGTTGACCT ATGTGCCGAT CGCGGCGCTG TCTTTGAACC TTGGCCACTT CATGCTGGGG TCCCGCCCGA CCGTGGGCGT CAACGACAGC CTGTTCCGGC GATTTGGCGG GGCGTCCCGC GATTTGTGGC ACAACATCAA GGCGCTGTTC ACGCCCGAGC AGGCCCATTG GGGAGAGCTG CAGATCTTCT GGGACACGGT CATGTGGCCC TGGACGGTTG GCGGCATTCT GCCCGGCCTT CTGTGCGGTA CGATCTGCTA TTTTCTGACC GTGCCCGTGG TGCGGGCCTA CCAGAAAAGC CGTGCAGCCC GATTGCGGAA GAAGATGGAC AAGCTGCGCA AGCAAGCGGA AGCGGCGGAG TGA
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Protein sequence | MFRRRDYRPW YRIILEVLWP RGGWLRAAQY VQHRMRRLPG TPEQIARGVF AGAVTVFTPY FGLHFVIAAL LARAMRGSIF AALLATFIGN PLTYVPIAAL SLNLGHFMLG SRPTVGVNDS LFRRFGGASR DLWHNIKALF TPEQAHWGEL QIFWDTVMWP WTVGGILPGL LCGTICYFLT VPVVRAYQKS RAARLRKKMD KLRKQAEAAE
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