| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0484 |
|---|
| Symbol | |
|---|
| ID | 3932925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 482260 |
|---|
| End bp | 483906 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902829 |
|---|
| Product | electron-transferring-flavoprotein dehydrogenase |
|---|
| Protein accession | YP_508426 |
|---|
| Protein GI | 89052975 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA TCGAACGCGA GAGCATGGAA TACGACGTTG TCATCGTGGG TGCGGGCCCC
GCTGGCCTGT CGGCGGCGAT CCGGCTGAAA CAGTTGGACG CGGAGCTGAA TGTCGTCGTG
TTGGAGAAGG GGTCCGAGGT GGGCGCGCAT ATCCTGTCGG GCGCGGTTCT GGACCCGGTT
GGCCTGGATG CGCTGATCCC CGACTGGCAG GACAAGGGCG CGCCGCTGAA TGTGCCGGTG
AAGGACGACA ACTTCTACAT GTTGGGTGAG GCGGGCGGCA TCCGTATCCC CAACTTCCCC
ATGCCGCCGC TGATGAACAA CCACGGCAAT TACATCGTTT CCATGGGCAA CGTCTGTCGC
TGGATGGCGG AGCAGGCCGA GGCGCTGGGG GTGGAGATCT TCCCCGGTAT GGCGTGTTCG
GAGCTGGTAT ATGGCGATAA CGGCGAAGTG CGGGGCGTCG TCGCGGGCGT GTTTGGATTG
GAGGCCGACG GGTCCATCGG GGAAGGCACG GAGCCCGGTA TGGAACTGCT TGGCAAGTAC
GTGTTCCTGT CCGAAGGCGT GCGCGGGAGC CTGAGCCAGG AGGTCATCGG GAAGTACAAT
CTTGCCACCG GATATGAGCC GCAGAAATAC GGCCTCGGCA TGAAAGAGAT CTGGGAGATT
GATCCCGAAA AGCACCGTGA AGGCAGCGTG ACCCACACGA TGGGCTGGCC TCTGGGCAAG
AACGCTGGCG GCGGCAGCTT TATCTATCAC CTTGAGAATA ATCAGGTTTA CGTGGGTTTC
GTCGTTCACC TGAACTATAA GAACCCGCAT CTGTTCCCTT ACATGGAATT CCAGCGTTTC
AAGCATCACC CGATGGTGGC GGAGCTTCTG AAGGGCGGAA AGCGCATCGC ATACGGTGCC
CGCGCCATCA CCGAAGGCGG CTATCAGTCC ATGTGCAAGA TGGTGGCCCC CGGCGTGGCG
TTGCTGGGCT GTTCCGTGGG CATGGTTAAC GTGCCGCGCA TCAAGGGCAA CCACAACGCG
ATGCTGTCCG GTAAGGCAGC GGCGGAGGCG GCATATGCTG CGATCCAGGA CGGTCGGGCG
TCCGACGAAT TGTCCGATTA TGAGATTGAA GTGCGCGAAG GGGCTATCGG TCAGGACCTG
AAAAAGGTGC GCAATGTCAA GCCGATGTGG TCGCAGAAAG GCCTTGTGGC CTCGCTGGCG
TTTGGCGGTC TGGACATGTG GACCAACACG CTTGGCTTCA GCCTGTTTGG CACGATGAAG
CACGGCAAGA CGGATGCAGA CGCGACCGAG AAGGCCGCAC GCTGGAACCC GATTGAGTAT
CCGAAACCCG ATGGTGTGCT GTCCTTTGAT CGGCTGACCA ACGTCGCCTT CTCCTTCACC
AACCATGAGG AAAGCCAACC CGCACACCTG CGGTTGCGCG ACAGCACCGT GCCCGTTGCG
GTGAACCTGC CAGATTATGC GGGCCCGTCG CAAAGGTACT GCCCGGCGGG GGTTTATGAG
TTCGTGAAGG ATGGGGACGA CGACAAGTTC GTGATCAACT TCCAGAACTG CGTTCACTGC
AAGACCTGTG ACATCAAGGA CCCGTCCCAG AACATCCACT GGACGGTGCC CCAGGGCGGT
GACGGGCCGA ATTACCCCAA CATGTGA
|
|---|
| Protein sequence | MSKIERESME YDVVIVGAGP AGLSAAIRLK QLDAELNVVV LEKGSEVGAH ILSGAVLDPV
GLDALIPDWQ DKGAPLNVPV KDDNFYMLGE AGGIRIPNFP MPPLMNNHGN YIVSMGNVCR
WMAEQAEALG VEIFPGMACS ELVYGDNGEV RGVVAGVFGL EADGSIGEGT EPGMELLGKY
VFLSEGVRGS LSQEVIGKYN LATGYEPQKY GLGMKEIWEI DPEKHREGSV THTMGWPLGK
NAGGGSFIYH LENNQVYVGF VVHLNYKNPH LFPYMEFQRF KHHPMVAELL KGGKRIAYGA
RAITEGGYQS MCKMVAPGVA LLGCSVGMVN VPRIKGNHNA MLSGKAAAEA AYAAIQDGRA
SDELSDYEIE VREGAIGQDL KKVRNVKPMW SQKGLVASLA FGGLDMWTNT LGFSLFGTMK
HGKTDADATE KAARWNPIEY PKPDGVLSFD RLTNVAFSFT NHEESQPAHL RLRDSTVPVA
VNLPDYAGPS QRYCPAGVYE FVKDGDDDKF VINFQNCVHC KTCDIKDPSQ NIHWTVPQGG
DGPNYPNM
|
|---|
| |