Gene Jann_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0342 
Symbol 
ID3932783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp346989 
End bp347519 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637902687 
Producthypothetical protein 
Protein accessionYP_508284 
Protein GI89052833 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCT ACCTCAGATT TGGCGCGCTT GTGCTGCGCG AACGTCGCCT GCCTCCGATG 
GGCATCTATG ACACGCACGC CATGCAGATG ACCTGCCTGC CGGTCGATAT CGACGGGTTT
CTGGAGATGA ACAATGGCCG CATCCTGACC CTTTTCGATC TGGGCCGCTT CGCCCTGTCG
ATCCGCATCG GGTTGTTCGA GGTCTTGAAG GCGCAAAAAT GGGGCCTTGT GGTGGCGGGC
TCGACCGTGC GCTACAGGTC CCGCATCACG ACATTCCAAA CGTTTGAGAT GCGGACGAGG
TTCCTCGGCT GGGACCAGCG GTTCTTTTAT CTGGAGCAGG CCATGTGGCG CGGGGACATC
TGTTGCAACC ATGCGCTTTT GCGGACCGGT GTGACCGCCA AGGGGCGATT GGCCCCGGTG
GGCGATGTGG CAAAGGCGCT TGGTGTCGAA GGGGACAGCC CGCCGCTGCC CGCATGGGCG
CAACGCTGGG CTGAGGCCGA CGGGACACGG CCCTGGCCAC CGGAATTCTA G
 
Protein sequence
MYPYLRFGAL VLRERRLPPM GIYDTHAMQM TCLPVDIDGF LEMNNGRILT LFDLGRFALS 
IRIGLFEVLK AQKWGLVVAG STVRYRSRIT TFQTFEMRTR FLGWDQRFFY LEQAMWRGDI
CCNHALLRTG VTAKGRLAPV GDVAKALGVE GDSPPLPAWA QRWAEADGTR PWPPEF