| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0278 |
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| Symbol | |
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| ID | 3932716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 284199 |
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| End bp | 285170 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902621 |
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| Product | putative DNA topoisomerase I protein |
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| Protein accession | YP_508220 |
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| Protein GI | 89052769 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.402986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCCG ACGGTTTGAT CTACTATCCC GATAGCCAGC CCGGCATTTC CCGGCGTCGC
TGCGGACGTG GGTTCAGCTA TCGCGCGCCC GACGGCACCA CCATCGCAGA TACCGATATG
CGGCGCCGGA TCGACGCATT GGCCGTGCCG CCAGCCTATA ACCATGTCTG GATCAGCCCG
CGTCTGAATG GGCATCTGCA AGCCACGGGA TATGATGCCG CGACGCGCAA GCAATACCGC
TACCACCCCG ACTGGACCCG CTTCCGCGCC AATCGCAAGT TCGAGGATCT GCCACGGTTC
GGTCATGCGC TGCCCCGCCT GCGCGCGGCA ATCCGAACTG GGCTGGAGGC AGAACCGGGC
AGCCGTGACT TCGTGCTGGC CGCCGTTCTG GGCCTGATCG ACCGTCTCTC GCTCCGCCCC
GGTCATCCGG ACTATGCGGA GGCCAACGGC AGTTTCGGGG CAACAACGCT CCGCTCCCGC
CACCTTCTGG CCGACGAGGA CGGGACGCGG CTGCGGTTTC TGGCCAAGGG TGGCCAAAAG
GTCAGCAAGA CCCTGCGCGA CAAGACGTTG GCCCGGGCCC TTCACAAACT TGATGATCTC
CCCGGCGCGC CCATCGCGAC CTGGCTGGAG GGTGATGAGG TGCGCACCGT CTCGCCTGAT
ATGCTGGCGT CCTTCATGGC AGATGTAACC GGAGAAGATG GGCTGACACC AAAAACCTTC
CGCACATGGA ATGGATCGGT CGCTGCGATG GATGTGGCCC TGAGCAATGA CGATCTGACG
ATCTCCGCCA TGGCCGATGC GGCGGCAAAA CGGCTTAACA ACACGCCGAC GATGGCCCGC
AACAGCTACA TCCACCCGGA GGTGATCGCG TTGAGCGAGA CGGAGCCGGA TGTCCGCAAG
ATCCTTGCCG ACGCGACAAC CCCCACACGG TTGCGCAGGT CAGAGCGCGC CCTGCTAAAC
CTGATCGGCT GA
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| Protein sequence | MLPDGLIYYP DSQPGISRRR CGRGFSYRAP DGTTIADTDM RRRIDALAVP PAYNHVWISP
RLNGHLQATG YDAATRKQYR YHPDWTRFRA NRKFEDLPRF GHALPRLRAA IRTGLEAEPG
SRDFVLAAVL GLIDRLSLRP GHPDYAEANG SFGATTLRSR HLLADEDGTR LRFLAKGGQK
VSKTLRDKTL ARALHKLDDL PGAPIATWLE GDEVRTVSPD MLASFMADVT GEDGLTPKTF
RTWNGSVAAM DVALSNDDLT ISAMADAAAK RLNNTPTMAR NSYIHPEVIA LSETEPDVRK
ILADATTPTR LRRSERALLN LIG
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