Gene Jann_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0255 
Symbol 
ID3932693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp255269 
End bp256321 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID637902598 
Producthypothetical protein 
Protein accessionYP_508197 
Protein GI89052746 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC TCCTTTTCGC GTCGCTCCTC GCAGCCTCCC CGATCCACGC CCAGGGTTTT 
GCGGGTCTGG GCACGGTCGC CGACGGGTTC GCGGTGCCCG CACCGAACCC GACATTCTCG
TTCCCCGACG ATCACGGCCC GCACCCCGAT TACCGGATCG AGTGGTGGTA TCTGACAGCC
ACCCTGACCG GCGCGGATGG GATCGACTAT GGCATCCAAT GGACTCTCTT CCGCAGCGCG
CTTGCGCCCA CCACGTCCAC GGATTGGACC GCGCCGCAGA TCTTCATGGG CCATGCGGGC
CTCACCACGC CCGATGCGCA CTTCAGTGCG GAGCGTTTGG CGCGTGGCGG CATCGGGCAG
GCCGGCGTCA CGCCCGTACC GTTCCGCGCC TTCATTGATG ATTGGGAAAT GACCTCCACC
ACAGCGGAAG GCGATGCCTA CGATGCCCTC TCCCTCACCG CGCGGGGGGT GGATTTCGCC
TATGACCTCG CCCTGCAAGC CAACGGGCCG CTGATCTTCC ATGGGCAAAA CGGCTTCTCG
GTCAAAAGCG CGGAGGGGCA GGCCAGTTAC TATTACTCGC AGCCTTTCTA CACGGTCACC
GGCACCCTCA CGCTTCCCAC TGGCGCGGTT GAGGTGTCCG GCAACGCCTG GCTCGACCGG
GAATGGTCAT CGCAACCCTT GTCAGACGAT CAGAGCGGAT GGGACTGGTT CTCCCTCCAA
CTCCCCGACG GTGCGCGGCT GATGGCGTTC GCCCTGCGCG ACACCAGTGA CCAGCCCTTC
ACGTCCGCCA CCTACATCGC GCCCGATGGC ACAACGCAAG CCTACGGTGA CGGTGCGATC
ACCTTGACGC CTTTGGTGAC AACGGATGTG GGCGGGCGGG ATGTCCCTAC GGAATGGCGG
CTCCAGTTTC CGGACCGGGG CATCGACATT ACGACGCAAC CGCTCAATCC GCAAAGTTGG
ATGGACACCT CCTTTCCCTA TTGGGAAGGC CCGATCACAT TCACCGGCAC CCACGATGGG
CGCGGATATC TGGAGATGAC CGGCTATGAG TGA
 
Protein sequence
MIRLLFASLL AASPIHAQGF AGLGTVADGF AVPAPNPTFS FPDDHGPHPD YRIEWWYLTA 
TLTGADGIDY GIQWTLFRSA LAPTTSTDWT APQIFMGHAG LTTPDAHFSA ERLARGGIGQ
AGVTPVPFRA FIDDWEMTST TAEGDAYDAL SLTARGVDFA YDLALQANGP LIFHGQNGFS
VKSAEGQASY YYSQPFYTVT GTLTLPTGAV EVSGNAWLDR EWSSQPLSDD QSGWDWFSLQ
LPDGARLMAF ALRDTSDQPF TSATYIAPDG TTQAYGDGAI TLTPLVTTDV GGRDVPTEWR
LQFPDRGIDI TTQPLNPQSW MDTSFPYWEG PITFTGTHDG RGYLEMTGYE