Gene Jann_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0189 
Symbol 
ID3932626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand- 
Start bp182236 
End bp182847 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID637902531 
ProductSmr protein/MutS2 
Protein accessionYP_508131 
Protein GI89052680 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.524914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.882367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC GTGGCAAACG GGGTCTGTCG GCGGACGACA AGGCGATTTG GGAGAAGGTT 
GCGGCGACGG CGACGCCCAT GGATCGCTCT GGCGTACCCA AGATCACTGA AGAAACGCTG 
CCCAAGAAAA CGCCCCCGCT CCGCCCGCAA CCGTCGACAA CCGCCGACAG GCTTCCCGCC 
TTTCGGGTGG GCGAAAAGTC GTCGTTCAAC AAAGGAGCCG TCAACCACGC GCCGAGCCTG 
TCGGTACAGC TTGCCCATGC CCCGGTCCGT ATGGATCATG GCACGCACAA ACGCATGACA 
CGGGGCAAGC TGAAGCCGGA AGGGCGCATT GACTTGCACG GTATGACCCT GTCTGAGGCG 
CACCCCGCGC TCATCAGTTT TATTTTCCAT GCCCATGAAG CGGAGAGGCG TTTGGTCTTG 
GTGATTACCG GCAAAGGAAA GGACCGCGAT AGTGGCGGGC CGATCCCGAT CCGGCGGGGA 
ATCCTCAAAC ACCAGATTCC GAATTGGCTG ACCTCGCCCC CGCTGGGTGC GATGATCCTG 
GATATACGGG AAGCGCATCA ACGGCACGGT GGTGGCGGAG CTTATTACGT GTATCTCAAG 
CGCCGTCGCT AA
 
Protein sequence
MARRGKRGLS ADDKAIWEKV AATATPMDRS GVPKITEETL PKKTPPLRPQ PSTTADRLPA 
FRVGEKSSFN KGAVNHAPSL SVQLAHAPVR MDHGTHKRMT RGKLKPEGRI DLHGMTLSEA 
HPALISFIFH AHEAERRLVL VITGKGKDRD SGGPIPIRRG ILKHQIPNWL TSPPLGAMIL 
DIREAHQRHG GGGAYYVYLK RRR