Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0184 |
Symbol | |
ID | 3932621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 177364 |
End bp | 178086 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637902526 |
Product | hydroxyneurosporene synthase |
Protein accession | YP_508126 |
Protein GI | 89052675 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.7318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACC GGGGGGAAGA GGCCTTGAGC CTGTCCCGCG ATACGCTTCA GATCGGGCCA AGTGCGATGG TCTGGAAGGG CGACCAGCTT GAGGTTCACA TCGATGAGAT CTCCACGCCC CACGCCCAAC GCGTGAAGGG AACTGTCACG ATCCACCCCA CCGCTGTCAC GGACCAGGAG CTACTGTTGA ACCCGGACGG TGCCCACGTT TGGCGACCTT TTGCGCCCAC CGCCCGGATT GAGGTTGCGC TGAACAGGCC CGGTTGGACG TGGTCCGGCC ACGGTTATTT TGACGCCAAT TTCGGCACCC GCGCGTTGGA GGCCGATTTT AGCTATTGGA CGTGGGGACG GTTCCCCCTG CGGGACGGAT CGGCTTGTTT CTACGATTTG GAGCGGCGCG ACGGGACGAG CCTGGCAACT GGGGTCGGTT TTGCCGCCGA TGGCACGCCA CATACCATCC AGATGCCGCC AAAACAGAGA CTAAAGCGCC CGTTTTGGAT GGTTCGCCGC GACACGCGGG CCGATGCCGG ATACACGCCC CGTCAGGTCA AACCGATGCT GGATGCGCCA TTCTACAACC GCTCCGCCAT TCGCACGCAG ATCAACGGCG AGGAAACCGT CGGCGTCTAT GAAGCACTGG ACCTTGACCG GTTTCGCGGC CCCTGGCTGA TGCCGATGCT GGCCATGCGC GTGCCGCGCC GCAAAGGTTG GCCCGGCACG TAG
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Protein sequence | MTDRGEEALS LSRDTLQIGP SAMVWKGDQL EVHIDEISTP HAQRVKGTVT IHPTAVTDQE LLLNPDGAHV WRPFAPTARI EVALNRPGWT WSGHGYFDAN FGTRALEADF SYWTWGRFPL RDGSACFYDL ERRDGTSLAT GVGFAADGTP HTIQMPPKQR LKRPFWMVRR DTRADAGYTP RQVKPMLDAP FYNRSAIRTQ INGEETVGVY EALDLDRFRG PWLMPMLAMR VPRRKGWPGT
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