| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0135 |
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| Symbol | |
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| ID | 3932572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 124403 |
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| End bp | 125809 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902477 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_508077 |
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| Protein GI | 89052626 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0383908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA AGACGCTTTA CGACAAAATC TGGGACGCTC ACCTGGCCCA TGAGGCCGAA
GACGGCACCA GCCTTCTCTA TATTGACCGC CATCTGGTCC ACGAAGTGAC CAGCCCCCAG
GCGTTTGAGG GTTTGCGTAT GGCGGGCCGT TCGGTTCACG CGCCCGACAA GACCATCGCC
GTGCCGGACC ACAATGTGCC GACGACGGAA GGCCGGGACG ACCCCAAGAA CATGACCGAG
GACAGCGCCA TTCAGGTGGC GGCTTTGGAC AAGAACGCCA AGGATTTCGG GATTCACTAT
TACCCCGTGT CCGATGTACG CCAAGGCATC GTGCATATCG TGGGGCCGGA ACAGGGCTGG
ACGCTTCCGG GCATGACGGT TGTGTGCGGG GATAGCCACA CGGCCACCCA CGGCGCGTTT
GGCGCGCTGG CCCATGGCAT CGGCACATCC GAGGTGGAGC ATGTTCTGGC GACGCAAACG
CTGATCCAGA AGAAGTCCAA GAACATGAAG GTGGAGATCA CGGGCAAACT GGCGCCCGGC
GTCACCGCCA AGGACATCAC GCTGACCGTC ATTGGCCGCA CAGGCACGGC GGGCGGCACC
GGCTATGTGA TTGAATATTG CGGCGAGGCG ATCCGCGACC TGTCCATGGA AGGGCGGATG
ACCGTCTGCA ACATGGCGAT TGAAGGCGGC GCGCGGGCGG GCATCATTGC GCCTGACGAG
AAGACGTTTG AATACTGTAT GGGTCGCCCG CACGCGCCGA AAGGGGCGCA ATGGGAGGCC
GCTTTGGCGT GGTGGAAGAC GCTGTATTCC GACGACGACG CCCATTGGGA CGAGGTCGTG
ACGATCCGCG GCGAGGATAT CGCGCCTGTG GTCACCTGGG GCACCTCGCC CGAGGATGTT
TTGCCCATCA CGGCGGAGGT TCCCGCGGCA GACAGCTTTG AGGGTGGCAA GGTCGGTGCG
GCACAGCGAT CACTGGACTA CATGGGACTG ACGGCGGGCA CGCCGCTGGA TCAGATCGAG
ATCGACACGG TGTTCATCGG GTCCTGCACC AACGGACGGA TTGAAGATCT GCGGGCTGCG
GCCTCGATCC TGAAGGGCAA GAAGGTCAAG GACGGCCTGC GGGCGATGAT TGTGCCGGGC
TCGGGCCTTG TGCGGGCGCA GGCCGAGGAA GAAGGCTTGG CCGATATCTT CAAGGATGCT
GGCTTTGAGT GGCGTCTTGC GGGCTGTTCC ATGTGCCTCG CGATGAACCC CGATCAGCTG
TCGCCTGGAG AGCGGTGCGC GGCCACGTCC AACCGCAACT TTGAAGGTCG CCAGGGCCGT
GGAGGACGGA CGCATCTGAT GTCACCGGCG ATGGCTGCCG CCGCCGCGAT CACAGGCCGC
CTGACGGATG TGCGCGAGTT GATGTAG
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| Protein sequence | MTGKTLYDKI WDAHLAHEAE DGTSLLYIDR HLVHEVTSPQ AFEGLRMAGR SVHAPDKTIA
VPDHNVPTTE GRDDPKNMTE DSAIQVAALD KNAKDFGIHY YPVSDVRQGI VHIVGPEQGW
TLPGMTVVCG DSHTATHGAF GALAHGIGTS EVEHVLATQT LIQKKSKNMK VEITGKLAPG
VTAKDITLTV IGRTGTAGGT GYVIEYCGEA IRDLSMEGRM TVCNMAIEGG ARAGIIAPDE
KTFEYCMGRP HAPKGAQWEA ALAWWKTLYS DDDAHWDEVV TIRGEDIAPV VTWGTSPEDV
LPITAEVPAA DSFEGGKVGA AQRSLDYMGL TAGTPLDQIE IDTVFIGSCT NGRIEDLRAA
ASILKGKKVK DGLRAMIVPG SGLVRAQAEE EGLADIFKDA GFEWRLAGCS MCLAMNPDQL
SPGERCAATS NRNFEGRQGR GGRTHLMSPA MAAAAAITGR LTDVRELM
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