| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0083 |
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| Symbol | |
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| ID | 3932519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 77871 |
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| End bp | 79730 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902424 |
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| Product | ABC transporter related |
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| Protein accession | YP_508025 |
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| Protein GI | 89052574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGC TGATGCGCAT TGTAGATTGG CTTGCCGGTT TGGTGCCGCC CTTCGCCGCC
GCAGACGGCC CGCCCCCGCA GGTTCTGTGG CCCTTCATGA AGTGGTGCCT GTCCGGGTCC
TGGCCCATCC TGTTCATCGC AGCCCTGATG TCGGGGCTTG CGGGATTGAT GGAGGTTGCC
GCCGCCTGGT TTCTAGGTGC GCTGATTGAT ACAGCAACGG GTCCAAGCGC CGATTACCTC
GGCACCCACG GGCTGCTGAT TGCGGCGTAT ATCCTGTTCT ATCTGGCGCT CCGCCCGCTG
TTCTTCGGGA CCTCGGCGGC GTTCACCGGC ATCGTCCTGC CGCCCAACAT CGCGCCGCTT
GTGCAATCGC GCCTGCACCG CTGGACGCTT GGCCATGACA TCACGTTCTT CGACAACGAC
TTTGCCGGGC GCATTGCGCA AAAGCAGATG CAGGCCGCCA CCGCGATGGT GAATATCGTG
ACCGAAGTCA TCAACGCCGC CGCCTACGCG ATCATCACGC TGATGGGCAC AATCGTGCTG
CTGGTGGCGA TTGACTGGCG CATCGGTCTG GCGCTGCTGG TGTGGTGCGG GCTCTATGCC
ATGCTGATCC GCTGGTATCT GCCGCGCATC CGGGTGCGGT CCAAGGCGCG GGCGGCCACG
CGGGCCAATG TCACCGGTCA GGTCGTGGAC ACGATCACCA ACATCAAGAC CGTGAAGCTG
TTCGGGCATA CGGACCATGA GGATGCCGCC GCCACCGGCG CGATGGACAG CTACCGCAGT
GCCGCGCTGC GCTTCGGTGT GCTGTCCACC GGCTTCCGGT TTGTCCTCAT GGCGACCGCC
GGGCTTTTGC CTGTTATCCT TGTTCTCGGC GGCGTGGCGC TGTGGCAGGC TGGTCAGGCG
ACGCCGGGTG ACATCGCCGC CATCGGTGCG ATTTCGATGC GAATTTCCCA GATGACGGGG
TGGGTGTCAT TCACGCTGAT GGGCATCTAC GCCAACCTTG GGGAGTTGGA GGACGGGATG
CGCACCCTGA CCCCCGCCCA TGGCCTGACG GATGAGGTCA CCGCACAACC CCTGCCGCGC
CTGACCGGAG AAATCCGGTT CGACGCCGTT TCCTTCGCCT ATGGTCAGCG GACCGGCGGC
ATCGACACGA TCGACCTGAC CGTTCAGCCG GGCGAAAAAC TGGGCGTTGT GGGCGCGTCG
GGCGCGGGCA AATCCACGCT CGTCGCACTT CTGATGCGGC TCTATGATGC GGAACAGGGT
CGTGTTTTGG TGGACGGCAC CGATGTCCGC ACGGTCACGC AAGACAGCCT GCGCCAGCAG
ATCGCGATGG TCACCCAGGA CACCGCGATG TTCAACCGCA CCGCGCGGGA CAACATCCTG
TATGGGCGTC CCGATGCGAG CGAGGCCGAG GTGATCGAGG CGGCCAAACG GGCGGAGGCC
CATGACTTCA TCCAGGACCT GCGCGATCAC CGCGGCCGTC AGGGCTATGA CGCGTTTCTG
GGCGAGCGCG GCGTGAAACT GTCAGGTGGG CAACGGCAAC GCGTGGCGCT CGCTCGCGCC
TTCCTGAAGG ACGCGCCGGT GCTGGTTCTG GACGAGGCCA CCAGCGCCCT GGACAGCGAA
GTGGAGGCCG CCATTCAGGA CACGCTCCAT TCGGTGATGG AAGGGAAAAC CGTCATCGCC
ATCGCCCACC GTCTGTCCAC CCTGTCGGCT ATGGACCGCA TCATTGTGCT GGATCAGGGG
CGCATCGCAG AGGACGGCAC CCACGCCGAA TTGCTTGCGT CAGACGGCCT CTACGCCCGG
TACTGGAACC GCCAGTCCGG CGGGTTCATC GGGCTGGAAG ACGCGACGGC GGCGGAATAA
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| Protein sequence | MNRLMRIVDW LAGLVPPFAA ADGPPPQVLW PFMKWCLSGS WPILFIAALM SGLAGLMEVA
AAWFLGALID TATGPSADYL GTHGLLIAAY ILFYLALRPL FFGTSAAFTG IVLPPNIAPL
VQSRLHRWTL GHDITFFDND FAGRIAQKQM QAATAMVNIV TEVINAAAYA IITLMGTIVL
LVAIDWRIGL ALLVWCGLYA MLIRWYLPRI RVRSKARAAT RANVTGQVVD TITNIKTVKL
FGHTDHEDAA ATGAMDSYRS AALRFGVLST GFRFVLMATA GLLPVILVLG GVALWQAGQA
TPGDIAAIGA ISMRISQMTG WVSFTLMGIY ANLGELEDGM RTLTPAHGLT DEVTAQPLPR
LTGEIRFDAV SFAYGQRTGG IDTIDLTVQP GEKLGVVGAS GAGKSTLVAL LMRLYDAEQG
RVLVDGTDVR TVTQDSLRQQ IAMVTQDTAM FNRTARDNIL YGRPDASEAE VIEAAKRAEA
HDFIQDLRDH RGRQGYDAFL GERGVKLSGG QRQRVALARA FLKDAPVLVL DEATSALDSE
VEAAIQDTLH SVMEGKTVIA IAHRLSTLSA MDRIIVLDQG RIAEDGTHAE LLASDGLYAR
YWNRQSGGFI GLEDATAAE
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