Gene Jann_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0057 
Symbol 
ID3932493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp52350 
End bp53039 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID637902398 
Productchloramphenicol acetyltransferase 
Protein accessionYP_507999 
Protein GI89052548 
COG category[V] Defense mechanisms 
COG ID[COG4845] Chloramphenicol O-acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCG AACGCGCGTG CAGGTATGGC GTGTGTCAGA TATGCGTCGA AGAGGATCCG 
CCAGTGGAAC ACCCCGTAGA TTTAGCTGCC TGGCCCCGTG CGGCGCAGTT CTATTTTTTC
CGGACCTTCG ACCGCCCACA TTTTGCAGTG ACTTCCCGCA TCGACGTGAC TGACCTGATG
GAGCGGCTGA AGCCTCAAGG CATGTCTCCT TACCGTGCAA GTCTTTATGC GATCGGTGCG
GGCATCCATG CGGTGCCCGA ACTGTTGATG CGGTTTAGGG GCGACACGGT CGTGCGCCAC
GACGCGGTAG AGCTTTCCAT GACCGTCCCC ACCAAGGCCG GCAGTTTCAA CTATGCCTAC
GTGCCCTTCG ACCCTGATTT CAGTCAGTTC AACCACGTTG CCAACGCCCT GATTCAGGCC
GCGTCCGAGA TGGTAGCGCT TGCTGCCAAT TCCGGCACTC GCGATGACCT TTGTTATATG
TCCTGTCTGC CGTGGCTCGA CTATTCGTCG ATCAACAACG CAATGCCCGG CCCTGAGGAT
TGCATTCCCC GGGTCAGCTG GGGGAAGATC GTCAAAACCG CAGATGGATG GTCCATGCCG
ATGACGCTGG AAGTGCATCA TGCGCTGGTC GACGGTGCCC ATGTCGGCGC TTATTTCGCG
GCGGTTCAAG GGGCGCTGGA TGGCCTCTAG
 
Protein sequence
MALERACRYG VCQICVEEDP PVEHPVDLAA WPRAAQFYFF RTFDRPHFAV TSRIDVTDLM 
ERLKPQGMSP YRASLYAIGA GIHAVPELLM RFRGDTVVRH DAVELSMTVP TKAGSFNYAY
VPFDPDFSQF NHVANALIQA ASEMVALAAN SGTRDDLCYM SCLPWLDYSS INNAMPGPED
CIPRVSWGKI VKTADGWSMP MTLEVHHALV DGAHVGAYFA AVQGALDGL