| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_1683 |
|---|
| Symbol | lpxB |
|---|
| ID | 5389684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 1484379 |
|---|
| End bp | 1485473 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640862603 |
|---|
| Product | ipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001398664 |
|---|
| Protein GI | 153952025 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0568935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TTTTAGTTTG TGCTTTAGAG CCTTCAGCAA ATTTGCATTT AAAAGAAGTT
TTAAAAGCTT ATAAAAAAGA CTTTAGCAAA TTTGAACTTC ATGGGATTTA TGATGAGAGT
TTATGCAAAG AATTTGATTT AAATTCTAAA CCACTTTATA GCTCACATGA GTTTAGTGCT
ATGGGTTTTA TAGAAGTTTT GCCTTTGATT TTTAAAGCAA AAAAAGCTAT AAAAGAGCTT
GTAAATTTAA GTTTTACTCA AAAAATGGAT GGGATTTTAT GTATAGATTC GCCCGCTTTT
AACATACCTT TTGCTAAGGC TTTAAAAAAA GCAGGCAGTA AAATTCCACG CATTTATTAT
ATCTTGCCTC AAGTTTGGGC GTGGAAAAAA GGTCGCATAC CTATCATAGA AAGTCATTTT
GATATTTTAG CTTCTATTTT GCCCTTTGAT AATCAGTTTT TTAACAAAAG CACTTATGTG
GGTCATCCGC TTTTAGATGA ACTAAAAGAA TTTAAAAACC AAGAAGACAT TAATAATACA
CTTTTAAAAA AAGATGATGA AAAAACTATA GCCTTTTTAC CGGGTTCAAG GCGTAGTGAA
ATTACGCGTT TAATGCCTAT TTTTAAAGAA CTCTCCCAAA AATTTAAAGG TGAAAAAATT
CTATGTGTTC CCCCGTTTAA TCTTGAAAAA TTAGAAATTT ATGGTGATAT TAGTGAATTT
AAGATAGAAA ATAATACTCC AAAAGTGCTT AAAAAAGCTG ATTTTGCCTT TATTTGTAGT
GGAACGGCTA CTTTAGAAGC AGCTTTAGTG GGAACTCCTT TTGTTCTTGC TTATAAAGCA
AAGGCTATTG ATATTTTTAT CGCAAAACTT TTTGTAAAAT TAAAACACAT AGGACTTGCA
AATATTTTTT GTGATTTTGC TAAAAAAGAA GCTTTAAATC CTGAATTTTT ACAAGATAAA
GTCAATGTTT TAAATTTATA TGAAGCTTAC AATAAATATG ATTATAAGGC ATTTTTTGCT
AAAGTTGATT TTTTAAAAGA ATATTTACAA TTTGGAAGTG CTAAAAATTT AGCAAAAATA
TTGAGTGAAA TTTAA
|
|---|
| Protein sequence | MKTFLVCALE PSANLHLKEV LKAYKKDFSK FELHGIYDES LCKEFDLNSK PLYSSHEFSA
MGFIEVLPLI FKAKKAIKEL VNLSFTQKMD GILCIDSPAF NIPFAKALKK AGSKIPRIYY
ILPQVWAWKK GRIPIIESHF DILASILPFD NQFFNKSTYV GHPLLDELKE FKNQEDINNT
LLKKDDEKTI AFLPGSRRSE ITRLMPIFKE LSQKFKGEKI LCVPPFNLEK LEIYGDISEF
KIENNTPKVL KKADFAFICS GTATLEAALV GTPFVLAYKA KAIDIFIAKL FVKLKHIGLA
NIFCDFAKKE ALNPEFLQDK VNVLNLYEAY NKYDYKAFFA KVDFLKEYLQ FGSAKNLAKI
LSEI
|
|---|
| |