Gene JJD26997_1248 details

Gene Information

• Locus tag: JJD26997_1248
• Symbol: speA
• ID: 5389574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: +
• Start bp: 1092928
• End bp: 1094760
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640862227
• Product: arginine decarboxylase
• Protein accession: YP_001398308
• Protein GI: 153952578
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000273662
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTATG GTATTGATAT TTGGGGAAAT GAAAATTTTA TTATCAAAAA TGGTAAAGTT 
TGTATCAATC ATGAGAAAAA ACCCGCTATT GTTGATATAG TTAAAGAATT AAGAGATGAT 
GGATATAAGG GGCCTTTACT TTTAAGATTT CCTCATCTTA TCCAAAAACA AATTGAAAAT 
ATCTACGGAA ATTTCAACAA AGCAAAAAAA GAATTTGGCT ATAAAGGAGG ATTTAACGCT 
GTTTATCCTT TAAAGGTCAA TCAATACCCT GGTTTTGTAA AAAACCTTGT AAAGCTTGGA 
AAAGACTATA ACTACGGACT TGAAGCAGGT TCTAAAGCAG AGCTTTTACT CGCTATGGCT 
TACAATAACG AAGGCGCACC TATTACAGTA AATGGTTTTA AAGATAGAGA ACTTATCAAT 
ATAGGCTTTA TTGCAGCTGA AATGGGACAT AATATCACCT TAACCATAGA AGGGCTTAAT 
GAACTTGAAG CTATCATAGA CATAGCCAAA GAACGCTTTA AACCTAAACC AAATATAGGC 
TTACGTGTGC GTTTACATTC TGCTGGAGTT GGAATTTGGG CAAAAAGCGG TGGGATTAAT 
TCTAAATTTG GACTTACATC CACTGAACTC ATAGAAGCAG TAAATTTGCT TAAAGAAAAC 
AAATTTTTAG AACAATTTAC CATGATTCAT TTTCATCTAG GCTCACAAAT TACCGAAATT 
CATCCCTTAA AAAAAGCCTT AAATGAAGCA GGAAATATCT ATACAGAACT TAGAAAAATG 
GGAGCTAAAA ACCTAAAAGC TATCAATCTT GGTGGTGGCT TAGCTGTAGA ATACTCGCAA 
TTTAAAAATG AAAAAAACAG AAATTATACC CTAAGAGAAT ACGCTAACGA TGTGATTTTT 
ATCCTAAAAA ATATAGCCGA ACAAAAAAAA GATTTAGAAC CTGATATTTT CATAGAAAGC 
GGGCGTTTTG TAGCAGCTAA TCATGCTGTT TTAATCGCTC CTGTATTAGA ACTTTTTTCC 
CAAGAATACG CAGAAAACAA ACTCATACTT AAAAAACAAA ACCCAAAACT TATCAACGAA 
CTTTATGATC TTTATAAAAG CATAAAGCCT TCCAATGCTT TAGAATACCT ACACGATAGC 
ATAGATCATT TAGAGAACAT TTTAACTCTT TTTGATTTGG GCTATGTGGA TTTACAAGAT 
CGTTCTAACG CTGAAATTTT AACCCATTTG ATTACAAAAA AAGCCATCTT GCTTTTAGGC 
GATAAGCAAA ATCCTGCAGA TTTACTTGCT ATACAGGATG AAGTGCAAGA AAGGTATTTA 
GTAAATTTTT CGCTCTTTCA AAGCATGCCT GATTTTTGGG GCTTAGAACA AAATTTCCCT 
ATCATGCCAC TTGATCGCTT AGATGAAGAA CCGACTCGAA GTGCAAGTAT TTGGGATATA 
ACCTGTGATA GTGATGGAGA AATTTCATAC TCTAAAGACA AGCCTTTATT TTTACACGAT 
GTAGATGTAG AAAAAGAAAA TTATTTTCTA GGATTTTTCC TTGTAGGTGC CTATCAAGAA 
GTACTTGGAA TGAAACACAA TCTTTTTACT CATCCTACTG AAGCTATTAT AAGTATCAAT 
GAGAAAGGCT ACGAAGTTGA AGGGATTATA GAAGCACAAT CCATACTTGA CGCTTTGGAA 
GATTTAGACT ATGATATACA CGCTATCATG GATATACTTA ATGAACGCAT AAGTAATTCC 
AAACTTGTAA ACGACAAACA AAAAAAACAT ATTTTAGGTG AGCTTTATCT TTTCTTAAAT 
GATAATGGTT ATTTAAAAAG CATAGGAGTT TAG 

 

Protein sequence

MDYGIDIWGN ENFIIKNGKV CINHEKKPAI VDIVKELRDD GYKGPLLLRF PHLIQKQIEN 
IYGNFNKAKK EFGYKGGFNA VYPLKVNQYP GFVKNLVKLG KDYNYGLEAG SKAELLLAMA 
YNNEGAPITV NGFKDRELIN IGFIAAEMGH NITLTIEGLN ELEAIIDIAK ERFKPKPNIG 
LRVRLHSAGV GIWAKSGGIN SKFGLTSTEL IEAVNLLKEN KFLEQFTMIH FHLGSQITEI 
HPLKKALNEA GNIYTELRKM GAKNLKAINL GGGLAVEYSQ FKNEKNRNYT LREYANDVIF 
ILKNIAEQKK DLEPDIFIES GRFVAANHAV LIAPVLELFS QEYAENKLIL KKQNPKLINE 
LYDLYKSIKP SNALEYLHDS IDHLENILTL FDLGYVDLQD RSNAEILTHL ITKKAILLLG 
DKQNPADLLA IQDEVQERYL VNFSLFQSMP DFWGLEQNFP IMPLDRLDEE PTRSASIWDI 
TCDSDGEISY SKDKPLFLHD VDVEKENYFL GFFLVGAYQE VLGMKHNLFT HPTEAIISIN 
EKGYEVEGII EAQSILDALE DLDYDIHAIM DILNERISNS KLVNDKQKKH ILGELYLFLN 
DNGYLKSIGV