| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0936 |
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| Symbol | |
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| ID | 5390470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | + |
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| Start bp | 833095 |
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| End bp | 835167 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640861958 |
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| Product | putative pillus assembly protein |
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| Protein accession | YP_001398050 |
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| Protein GI | 153951831 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA GATTAAAAAA TTACTATCTT TTAGTTTCTA TAAAATCTCA TACCGAAGAA
GATGTAATTT CTTATAAGCA TATTTTAAAA AATATTCTTA CTTCAAATAA TTTTTCACCT
GTTGTAGCTG AGCCTGAGAT TTTAAAACCT ATGCTTTACG AGCTTTTTAA TGGTAATCAT
GATATTAACA ATATTCCAAG TTATGATAGG ACTTGTTATC TTAATAGACA AGTTATTATG
CCTACAACAG AAATTTTAAT TCAAGATGAT GAGTTAAAAA TAGACGGTAG AAGTTTTATT
AGCTTAACTC CACAAACTTT TCCACAAGAA GCACATATTG CTGATTTTGG GGAAAAATTA
GGGGATTATA TAAGCAGGGC TTTAGACAAT AATCAATTCA AAGATACTTT TTTAATTACT
GCTTCTATTT GTGCTTTATC TAAGAAAAAA ACTACACGAG TAAGAAATAA TCATTCTATG
CTTTTGACAC AAAAATGGAG TGAAGCTATT TTTAGACAGT TTGCAGCAGC TAGAAAAGAA
AGCGTTTCCA TACTTGAAAG AATAGACAAT CAAAAAGAAA AGCTTTATGC TTTTGATTTG
AATGTTATAG TTAGTGGTGA TACTTATGAT GAAGCCTCAT TAAATGCAAG CACTATTATT
TCTTATTGGA ATAAAGGCGG TGGTAAAGCT ATTGTACTTG ATGAAGCTTT AGGAATTCAT
CAACTTAATC TTATTGCTTC TTTGCCTATG GGGATTAATA AAGAATATAT GTTTGATATT
ACTGCAAAAT ATCGCTCTAT GTTTCCTGAT CAAATTTCAC AATTCATTCC TTTAGAAGCA
GATTATAAAC TCAATATTCC AAATTTGATT TTATTCTCAA GAAGAGCACA AATCGCGTTT
GTTTCAAGTT CAAACTATAA TGCTTATTTG GTTGCTACTT CAGGCGCAGG AAAATCAGTA
TTTCTGAATA TGCTTGCTTT TAGTTCTTAT GCTAGAGGTG ATAGAATTTT CATTATCGAT
CAAGATAATT CTTTTATCAA GCTTTGCGAA GCAGTAGGAG GACAATATCT TGCGCTTGAT
CCTTCAAAAC CTATCAGTTT TAATCCTTTT AGCGGCTTAA AAAATAATGA TAGAGATTCT
TTCATGGAGG ATTTGGAGTA TCTATCAAAT TTGATTTACA TGTTGGGAAG TTCTAAAAAT
CAAGATAGAG CCTTAGAAGA TGAAAGACTT ATCAAGGCTA AAACACAAGC AATTATGGAA
GAGCTTTTTT TATCCAAAGG CAATACTATG GAAGTTACAG ATATTAGAGA TGAACTTGCT
AAGATAGATG ATCAACGCTT TAGAGATTTT GCAGATCAAT TACGCCCTTT TTGCAAAGAA
GGAATTTACG GTAAATATTT TAATGGTCCT TGCGAGTTTA ATATAGAAAA AGAATTTATT
GTAACTGAGT TTAAAGGGCT TGAAGGGTAT GATGATTTAA AAGATCCACT TATCATGCTT
TTAATCTATC ATATTAATCA GCTTATGTAT ATGAGTTCAG ATAGAAAATC AAGAATTCAA
ATCATCATTG ATGAGGCACA CCGCTTCTTA GGAAAAAATC CAAAAATGGA TGATTTCATC
GAACAAGCTT ATCGTCGTGC TAGAAAATAT GGTGCTTCTG CAATTATTGC AACTCAAGGT
TTTGATGATA TTTATAATGC TAAAGATGGG GGATTAAGTC GCGCAGGAAC GGTTATTATT
AATAATTCAG CCTATAAGAT TTTTATGAAG CAAACCGAAA CTTCTGTTAA TATGCTAATC
AAATCAGAAG TGTTTTCTCT AAGTGAAACC GATAAAGAAA TTTTGCGCTC TATTATGACT
ATAAAAGGGG AGTATTCAGA ACTTTTTTTA ATGACACCTG ATGATGTTAA ATTGCCTTAT
CGTTTGGTTA TGGATAACTA TTTTTATTAT CTTACCACTA CCGATGCAAC AGATAAGGCT
AAAATCAAAG AATTAACTGA TCAAGGAATA TCTTTAGGAG AAGCCATTGA ATTACTTGCT
AACACTAAGA CAAAAAGCAA TGAAACTAAG TAA
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| Protein sequence | MTARLKNYYL LVSIKSHTEE DVISYKHILK NILTSNNFSP VVAEPEILKP MLYELFNGNH
DINNIPSYDR TCYLNRQVIM PTTEILIQDD ELKIDGRSFI SLTPQTFPQE AHIADFGEKL
GDYISRALDN NQFKDTFLIT ASICALSKKK TTRVRNNHSM LLTQKWSEAI FRQFAAARKE
SVSILERIDN QKEKLYAFDL NVIVSGDTYD EASLNASTII SYWNKGGGKA IVLDEALGIH
QLNLIASLPM GINKEYMFDI TAKYRSMFPD QISQFIPLEA DYKLNIPNLI LFSRRAQIAF
VSSSNYNAYL VATSGAGKSV FLNMLAFSSY ARGDRIFIID QDNSFIKLCE AVGGQYLALD
PSKPISFNPF SGLKNNDRDS FMEDLEYLSN LIYMLGSSKN QDRALEDERL IKAKTQAIME
ELFLSKGNTM EVTDIRDELA KIDDQRFRDF ADQLRPFCKE GIYGKYFNGP CEFNIEKEFI
VTEFKGLEGY DDLKDPLIML LIYHINQLMY MSSDRKSRIQ IIIDEAHRFL GKNPKMDDFI
EQAYRRARKY GASAIIATQG FDDIYNAKDG GLSRAGTVII NNSAYKIFMK QTETSVNMLI
KSEVFSLSET DKEILRSIMT IKGEYSELFL MTPDDVKLPY RLVMDNYFYY LTTTDATDKA
KIKELTDQGI SLGEAIELLA NTKTKSNETK
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