| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0520 |
|---|
| Symbol | |
|---|
| ID | 5389542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 465170 |
|---|
| End bp | 466723 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640861605 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001397699 |
|---|
| Protein GI | 153951414 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAT CACTTATCGC ACTTATAGCC GCTATAGTCG GACTCGGTAT AGGATATTTA
GTTGCAAAAA AAATCAATGA TGCCAAATAT GAAATTTTCG TAGAACAAGC CAAAGCTAAA
GCCAAAGCTA TAGAATACGA AGCAGAGCTT ATTTTAAAAG ATGCAAAAAA TTCAATTCTT
AATGCAGAAT TAGAAGTTAA AAAAAAATAC GAAGAAAAAA CTCACAAAAT TCAAAAAGAT
TTTAATCAAA AATTGGATGA TCTTTTTAAA AAAGAACAAA AACTTCAGCA AGAAGAAGAA
AAACTAAAAG AAGATAAAGA ATACCTTTGC AAGTCACAAA AACACATTCA AGACTTACAA
TCTGATGTTG ATAAATTAAA AAATAAATAC CAAGAAAAAC TTGACGATGT TTTAAAAATT
TTAGAACATT CTACAAGACT TACACAAAAT GAAGCCAAAG AAATCATTCT TAAAAAAGTA
GAAGAAAATT CTCGCGAGCA AATTGCACAT ATAGTAAGAA AATATGAAGA AGAAGCAAAA
AATGAAGCCA AAAGAAAAGC TAATTTCATC ATTGCTCAAG CTACTTCTCG TTTTGCAGGT
GAATTTGCAG CTGAAAGACT TATCAATGTT ATTAACATTA AAAACGATGA ACTTAAAGGA
CGTATCATTG GTAAAGAAGG ACGCAATGTT AAAACCTTAG AAATGGTTTT AGGTGTTGAT
ATTATCATCG ATGATACACC AGGTGCTATC ATAGTAAGTT GTTTTAATCT TTATCGCCGT
GCCATTGCTA CAAAAGTTAT AGAACTTTTA GTTGAAGATG GCAGAATTCA ACCCGCGCGC
ATAGAAGAAA TTCACGAAAA AGTGTGCAAA GAATTTGATA GTGCTATTCT AGAAGAAGGC
GAAATCATAG TTATGGATCT AGGTTTAAAT AAAATACACC CTGAAATTGT AAAACTCATA
GGAAAACTCA AATACCGCGC AAGCTATGGA CAAAACGCTT TAGCACATTC TTTGGAAGTG
GCTCACCTTG CAGGAATCAT TGCTGCTGAG TGTGGTGGGG ATGAGAATTT AGCACGTCGT
GCGGGAATTT TACATGATAT AGGAAAAGCA TTAACTCATG ATTTTGAAGG ATCTCATGTG
GATTTAGGCG CAGAACTTTG CAATCGTTAT AAAGAGCATC CTGTAGTAAT CAATGCTATT
TACGCACACC ATGGGCACGA AGAAGCTACA AGCATAGAAT CAGCGGCTGT TTGTGCAGCA
GACACTTTAA GTGCTGCACG ACCTGGAGCT AGAAGAGAAG TGTTAGAAGC TTTCTTAAAA
AGAGTCAGTG AGTTAGAAGA TATCGCTAAA AGTAAGGAAG GAATTAAAAA TGCCTATGCA
ATCAATGCCG GAAGAGAAAT TCGCATTATA GCCAATGCCC AGCTTGTTAA TGATGATGAA
AGTGTACTTT TAGCCAAGGA AATAGCAGCT GAAATTCAAG AAAAAATGCA ATATCCTGGT
GAAATTAAAG TCAATGTTAT ACGCGAACTT AGGGCTATAG AATACGCTAA GTAA
|
|---|
| Protein sequence | MIESLIALIA AIVGLGIGYL VAKKINDAKY EIFVEQAKAK AKAIEYEAEL ILKDAKNSIL
NAELEVKKKY EEKTHKIQKD FNQKLDDLFK KEQKLQQEEE KLKEDKEYLC KSQKHIQDLQ
SDVDKLKNKY QEKLDDVLKI LEHSTRLTQN EAKEIILKKV EENSREQIAH IVRKYEEEAK
NEAKRKANFI IAQATSRFAG EFAAERLINV INIKNDELKG RIIGKEGRNV KTLEMVLGVD
IIIDDTPGAI IVSCFNLYRR AIATKVIELL VEDGRIQPAR IEEIHEKVCK EFDSAILEEG
EIIVMDLGLN KIHPEIVKLI GKLKYRASYG QNALAHSLEV AHLAGIIAAE CGGDENLARR
AGILHDIGKA LTHDFEGSHV DLGAELCNRY KEHPVVINAI YAHHGHEEAT SIESAAVCAA
DTLSAARPGA RREVLEAFLK RVSELEDIAK SKEGIKNAYA INAGREIRII ANAQLVNDDE
SVLLAKEIAA EIQEKMQYPG EIKVNVIREL RAIEYAK
|
|---|
| |