Gene JJD26997_0366 details

Gene Information

• Locus tag: JJD26997_0366
• Symbol: gcp
• ID: 5390173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: +
• Start bp: 319772
• End bp: 320779
• Gene Length: 1008 bp
• Protein Length: 335 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640861478
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: YP_001397575
• Protein GI: 153951317
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATC TTATCCTAGC TATAGAAAGT TCTTGTGATG ATAGTTCTAT AGCTATCATT 
GATAAAAATA CCTTAGAATG TAAATTTCAT AAAAAAATTT CCCAAGAATT AGAGCATAGC 
ATCTATGGAG GAGTGGTGCC TGAACTTGCT GCAAGGCTTC ATAGTGAGGC TTTACCAAAG 
ATACTTAAGC AAAGTAAAAA ATATTTTAAA AATCTTTGTG CCATAGCTGT GACAAATGAA 
CCTGGGCTTA GCGTTTCTTT GCTTGGTGGA ATTTCTATGG CAAAAACCTT AGCAAGTGCT 
CTCAATTTAC CTTTAATCCC TATAAACCAT CTTAAAGGTC ATATTTATAG TCTTTTTTTG 
GAAGAAAAAA TTTCTTTAGA TAGGGGAATT TTGCTTGTCA GTGGTGGGCA CACTATGGTG 
CTTTATCTTA AAGATGATGC AAACTTAGAG CTTTTAGCAA GCACAAATGA TGATAGCTTT 
GGAGAAAGTT TTGATAAAGT GGCTAAAATG ATGAATTTAG GTTATCCTGG TGGGGTTATC 
ATAGAAAATT TAGCAAAAAA TGCCAAGCTT AAAAATATCT CTTTTAACAC ACCTTTAAAG 
CATTCTAAAG AACTCGCTTT CAGTTTTTCA GGGCTTAAAA ATGCAGTGCG TTTGGAAATT 
TTAAAACATG AAAATTTAAA TGAAGATACA AAAGCAGAAA TAGCTTATGC CTTTGAAAAT 
ACGGCTTGTG ATCATATCAT GGATAAATTA GAAAAAATTT TTAATCTTTA TAAATTTAAA 
AATTTTGGCG TTGTAGGCGG AGCTAGTGCA AATCTTAACT TGCGTTCGCG TTTGCAAAAT 
TTATGTCAAA AATATAATGC AAATTTAAAA CTAGCTCCTT TAAAATTCTG CTCTGATAAT 
GCTTTGATGA TAGCAAGAGC CGCAGTTGAT GCTTATGAAA AAAAGGAATT TGTAAGCATA 
GAAGAAGATA TTTTAAGCCC TAAAAATAAA AATTTTTCAA GGATATAG 

 

Protein sequence

MKNLILAIES SCDDSSIAII DKNTLECKFH KKISQELEHS IYGGVVPELA ARLHSEALPK 
ILKQSKKYFK NLCAIAVTNE PGLSVSLLGG ISMAKTLASA LNLPLIPINH LKGHIYSLFL 
EEKISLDRGI LLVSGGHTMV LYLKDDANLE LLASTNDDSF GESFDKVAKM MNLGYPGGVI 
IENLAKNAKL KNISFNTPLK HSKELAFSFS GLKNAVRLEI LKHENLNEDT KAEIAYAFEN 
TACDHIMDKL EKIFNLYKFK NFGVVGGASA NLNLRSRLQN LCQKYNANLK LAPLKFCSDN 
ALMIARAAVD AYEKKEFVSI EEDILSPKNK NFSRI