| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0171 |
|---|
| Symbol | |
|---|
| ID | 5389783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 164031 |
|---|
| End bp | 164687 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640861313 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_001397414 |
|---|
| Protein GI | 153951044 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTT TGTATAACAA GCAAGCTGGA GAAGAATTTA TACAACTTCA AGGTGAAAAC
TTTAACCATT TAAAAGCAAG AAGAGTAAGG GAAAATTCGG AGCTAAATCT TAGAAATTTA
CAAGATAATT TTCTTTATAG CTATACAATC ACAGATTTAA CGAGAAATTC TTGCACTTTA
AAATTTTTAA ACAAAAAATT ACAAAATATA GAACAAAGTA AATTAAACCT AGCCTTAGCC
ATCATAGATA TTAAAATTTT AGAAAAAACT CTACCTTTCT TAAATGAACT TGGAGTAAAA
AAGCTACATT TGGTTTTTAC AAATTTTTCA CAAAGAAATT TTAAAATCGA TTTAGAAAGA
TTTGAAAAAA TCATTATTTC TTCTTGTGAA CAATGTGGTA GAAATACTAA AATGGATTTA
ATTATCCACC AAAGCACTCA AGAATTTGTT CAAAAATTTC CAGATGCAAT CATGGTTGAT
TTTCAAGGAG AACAACAAAG TCATTTCGAT GAAAAAGAAT TATATTTTAT AGGTCCTGAA
GGTGGATTTA ATAATGATGA GAAATTATTG TTTAACCGGA AAATCTCTCT TAAAAATTCT
AATATTCTAA AAAGTCAAAC AGCTATTATA GCTATAGCTT CAAAAATTTT GCTTTAA
|
|---|
| Protein sequence | MQFLYNKQAG EEFIQLQGEN FNHLKARRVR ENSELNLRNL QDNFLYSYTI TDLTRNSCTL
KFLNKKLQNI EQSKLNLALA IIDIKILEKT LPFLNELGVK KLHLVFTNFS QRNFKIDLER
FEKIIISSCE QCGRNTKMDL IIHQSTQEFV QKFPDAIMVD FQGEQQSHFD EKELYFIGPE
GGFNNDEKLL FNRKISLKNS NILKSQTAII AIASKILL
|
|---|
| |