Gene Huta_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_3008 
Symbol 
ID8385317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3098638 
End bp3099528 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID644974086 
Producthypothetical protein 
Protein accessionYP_003131902 
Protein GI257054069 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1503] Peptide chain release factor 1 (eRF1) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.01667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACG AGCTACTCGG TCGCGCTCGA CTCAGAGAGC GTATCGAGGA ACTCGAAGAC 
GAAAACCGCC ACCTAACGCG CCAGCTCGAC GCCGAGTCCG ACCGGCGAGC CGACGTCGAG
ACGGAGCGCC AGGCGGCCGA ACGCCGCGCG AACCGGCTCG ATGACCGGGT TCAGGAACTG
GAAGATCGCG TCGAACGGCT CTCGGGCTCC GAGCAGGAGC TATCCGTTCG GCGTCGTGAA
ACGCTCTGCG GTGACCGTCT CACGACGATT CTGGACCGTC TCGAATCCGT CGAAACTGAT
CCGGAAGGCG CACTGTCGGC GTTCGTCGGC GACGCGCCGC TCCCGGACGC TGTCAGCGAT
GCCTTCGGCG ACCGTTCGAG CCTCGTCTCG CGGGTCGCCC CCTGCTTCGC GTTCACCGAC
GACGCCCGCC TCCTCAGCGT GGCGCTGGAC CCGCCGATCG AGCCCGACCC GTTCGTCACC
TGGGATGACG GTGCTGTCTT CGATCGATCG CATTTCGAGC CGACGGGGGA ATTCACCCTG
GCGCTGGTCC GTTCTGACCT CTTTGCCATG GGAGAGTACC ACGGGCGCGA ACGGATCGCA
TTTCACGGCT TCGACAGTGA TCTGGGGCGC AATCATTCGA AAGGCGGCTT CTCGCAGGCG
CGCTTTGAAC GCCTTCGCGA CGAGCAGATC GACTCACACC TCGAACGGTG CCTGGTAGCC
CTCGAGGAGC GCTCGACCGA CCGGCTGTAC GTCGTCGGTG AGCAAACCGT GCTGGACGCG
TTCGAAGAGG CGGCTGACGC GACGGCGACT GTCGACGCCA CTGGCGATCC CGAACCGGCG
CTGGACGATG CGTTCTATGA CTTCTGGACG ACGACGCTGT GGGCGATCTG A
 
Protein sequence
MLDELLGRAR LRERIEELED ENRHLTRQLD AESDRRADVE TERQAAERRA NRLDDRVQEL 
EDRVERLSGS EQELSVRRRE TLCGDRLTTI LDRLESVETD PEGALSAFVG DAPLPDAVSD
AFGDRSSLVS RVAPCFAFTD DARLLSVALD PPIEPDPFVT WDDGAVFDRS HFEPTGEFTL
ALVRSDLFAM GEYHGRERIA FHGFDSDLGR NHSKGGFSQA RFERLRDEQI DSHLERCLVA
LEERSTDRLY VVGEQTVLDA FEEAADATAT VDATGDPEPA LDDAFYDFWT TTLWAI