Gene Huta_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2950 
Symbol 
ID8385259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3039171 
End bp3040322 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID644974028 
ProductProtein of unknown function DUF63 
Protein accessionYP_003131844 
Protein GI257054011 
COG category[S] Function unknown 
COG ID[COG1967] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.153375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA CTGGGTTCGA TCTCACGCCG GGACGAGCGT GGCTCGCGGT GTTCGCGGCC 
GGAGTCGTCA CGATCGTCGG CGCGTCGATC GCGTTCACAC GGACAGTCTG GGACGAATTC
ATCTGGCAGT ACTTCTGGGG GCCGGTCTAC GCCGACGCCC ACAACGCCGG CTGTGCGATC
AAGGAGGGGG GCCAGACACT CCTGGGTGGC AGCGGATTCG CCGAGAACTG CGGGATCGCC
GTCGAACAGG GCCACATCGT CGCCGAACCG GGCTATACCC TCGTCTCGGA AGCGGGCTAC
ATGGTCCTCG GGTTGTTCTT CCTGATCGGG GTTTACCTGC TGTTGAAGAA CCTCGACATC
GACCTTGATC GGGAGTTCTT CTACGCACTG TTCCCGTTCA TGTTGTTTGG CGGGGTCGTC
CGTGTCGTCG AGGACGCCAG TGACGCGGCC GTGGAGGCCG GTGTCGAGCC GGTGCTCTCC
TACCCGTTCA ATACGCTGTT CATCAGCCCG CTGGTCTACT TTACCGTGTT CGGGTTCGCT
ATCGCCGCCC TCGTCGGAAG TCTGCGACTT GCCGATCGTG GCGTGGTCGC CTCGGCCGAG
CGGGCACTGG GCACGGTCGG TGCCGTCGCC TTCGGCGTGA CGTTCGGGTA TCTGACAGTC
CTCGGCCTCA CCGTCGAGCA CGTCGACTTC CTGCCGCACG TTCTCCTCAT CATCGTCGGC
GGCGCAACGG TGGCTGCCTA CGGCGTCTAC GTCCTTGCCG ATCGGTTCGC ACCCTACATC
AACAGCGGGA CCGGCTACGT CGGACTGGTC GTCCTCTGGG CGCATGCGAT CGATGGCGTC
GCGAACGTCC TCATCACCGA CTGGGCGGAC GCACTCGGAT TGCCCGTCTC GTACTACCCA
AAACATCCGG CCAACGAAAT CATCATGAAC GTGACCGAAG CCGTTCTGCC GGCCGGCATC
TTCGACGCGA TCGGGAGCGC GTGGCCGTTC CTGGTGGTGA AACTTGGCAT GGCCCTGGGC
ATCGTCTGGC TGTTCGACGA GGCGTTCATC GAGGAGAATC CACGATACAG CTACGTCCTT
CTCGTGGGAG TCGTCGCCGT CGGACTCGGT CCCGGGTCAC GTGACATGCT CCGGGCCGCC
TTCGGGATCT GA
 
Protein sequence
MDETGFDLTP GRAWLAVFAA GVVTIVGASI AFTRTVWDEF IWQYFWGPVY ADAHNAGCAI 
KEGGQTLLGG SGFAENCGIA VEQGHIVAEP GYTLVSEAGY MVLGLFFLIG VYLLLKNLDI
DLDREFFYAL FPFMLFGGVV RVVEDASDAA VEAGVEPVLS YPFNTLFISP LVYFTVFGFA
IAALVGSLRL ADRGVVASAE RALGTVGAVA FGVTFGYLTV LGLTVEHVDF LPHVLLIIVG
GATVAAYGVY VLADRFAPYI NSGTGYVGLV VLWAHAIDGV ANVLITDWAD ALGLPVSYYP
KHPANEIIMN VTEAVLPAGI FDAIGSAWPF LVVKLGMALG IVWLFDEAFI EENPRYSYVL
LVGVVAVGLG PGSRDMLRAA FGI