Gene Huta_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2908 
Symbol 
ID8385217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2987902 
End bp2988300 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID644973986 
Productdeoxyribonuclease/rho motif-related TRAM 
Protein accessionYP_003131802 
Protein GI257053969 
COG category[R] General function prediction only 
COG ID[COG3269] Predicted RNA-binding protein, contains TRAM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATCT CAGAGAAACT CCTCTGTCTG TTCAGTGCGG ACGTCACTGC TGAGGACGAC 
CGGTACGTCG TCGAAGTACC GCGACGGGAA ATCGAAACGG GGTCGATCGA GCCCGGCGAA
ACCTATCGGA TCGCGCTCAT CTCGGGCGAT GAGGAATCGA CAGACGAGCA ACCGAGCACC
GACAGCGTCC CGAACGAGCC ACAGCCGCCG GTCGAGACCG GCGAGATCCG CTACGTCGAG
ATCGAAGACA TCGGCAAACA GGGCGACGGT ATCGCTCGGG TCGAGCGGGG CTACGTCATC
ATCGTGCCCG GCGCGGAGAT CAACGACCGC GTCAAGGTCG AAGTCTCCGA AGTCAAATCG
AACTTCGCGG TGGGCGAGAT CATCGAAGAA GACATCTGA
 
Protein sequence
MEISEKLLCL FSADVTAEDD RYVVEVPRRE IETGSIEPGE TYRIALISGD EESTDEQPST 
DSVPNEPQPP VETGEIRYVE IEDIGKQGDG IARVERGYVI IVPGAEINDR VKVEVSEVKS
NFAVGEIIEE DI