| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2784 |
|---|
| Symbol | |
|---|
| ID | 8385090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2856365 |
|---|
| End bp | 2857852 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644973859 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_003131678 |
|---|
| Protein GI | 257053845 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.757104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA ACAATCGACC GTTTTCGGCG AAACTTGAGG TACCGGAGGC GCTGACGTTC
GACGACGTAC TGTTGCGACC GAAGGAGAGT CGCGTCGAGC CTGACGATGC GACGACCGAG
ACCCATGTTT CGAAGAACGT CTCGCTGAAC GTTCCCGTTC TCTCGGCGGC GATGGACACT
GTCACCGAGA GTGACATGGC GATCGCGATG GCTCGTCACG GTGGCCTTGG CGTCATCCAC
CGGAATATGG ACGTCGACCG GATGGTCACC GAGATCGAGC GCGTCAAGCG CGCCGACGAA
CTCATCATCC GTGACGTTGT CACGGCCGAT CCGGACCAGA CTGTCCGTGA TGTCGACGCG
ATGATGCAAC GACAGGGTGT CAGCGGTGCC CCCGTGGTGG GTGACGACGA CGAGGTGCTC
GGTATCATCT CGGCGACGGA CATCCGACCG TACCTCGAAG TCGGCGATTC CGACGCTGTC
CGGGAAGCCA TGACTGACGA AGTCATCACG ACGGAAGCTG ATGTCTCCCC GCGTGAGGCG
CTCGAACTCA TGTACGAGCA CAAGATCGAG CGCGTCCCGA TCGTCGACGA GGAGAATCGA
CTCATCGGGC TCGTGACGAT GCAGGGGATC CTCCAGCGCC GTGAATACGA TCAGGCCGCT
CGTGACGGGA ACGGTCGCCT CCGATGTGGC GTCGCCGTCG GTCCCTTCGA GACGGAGCGG
GCCATCGCAG CTGACGACGC AGGTGCGGAC GTCATCTTCA TCGACTGCGC ACACGCACAC
AACCTCGATG TCGTCGACAC CGCTCGCGAT ATCAAAGCGG AAATCGACGC GGACATCGTC
GTCGGAAACA TCGGCACCCG GGAAGCCGCC GAGGACCTCG TCGACTTCGC CGACGGACTC
AAGGTGGGCA TCGGCCCGGG CAGTATCTGT ACGACGCGAA TCGTCTCCGG TTCGGGGATG
CCCCAGCTTT CGGCCGTCGC CGAGGTTGCC GACGTGGCCG CCGACCACGA CGTGCCCGTC
ATCGCGGACG GCGGTATCCG GTACTCAGGC GACGCAATCA AGGCCATCGG GGCCGGCGCG
GACGCCGTGA TGCTCGGGTC GTACTTCGCG GGCACCGACG AGGCTCCAGG TCGCATCATC
ACGCGCAACG GCAAGAAGTA CAAGCAGTAC CGTGGCATGG GCAGCGTCGG CGCGATGAAA
TCAGGCGGCG GCGAGCGGTA TCTCAAGGAC GTCGAAGACC AGGAAGAGGA GGACTACGTC
CCGGAGGGCG TCGAGGCCGC GACGCCGTAC CAGGGACCGG TCGAGAACGA ACTCCACCAG
ATGGTCGGCG GAATGCAGTC CGGCATGGGG TACGTCGGAG CCGAGTCGGT CCCGGAGTTC
CAGGAGCGCG CGGAGTTCGT TCGTGTCTCC AGTGCCGGCC AGCAGGAGAA CCATCCACAC
GACGTGCTCA TCACCGACGA AGCACCGAAC TACAGCCCCG GCGAATGA
|
|---|
| Protein sequence | MAKNNRPFSA KLEVPEALTF DDVLLRPKES RVEPDDATTE THVSKNVSLN VPVLSAAMDT
VTESDMAIAM ARHGGLGVIH RNMDVDRMVT EIERVKRADE LIIRDVVTAD PDQTVRDVDA
MMQRQGVSGA PVVGDDDEVL GIISATDIRP YLEVGDSDAV REAMTDEVIT TEADVSPREA
LELMYEHKIE RVPIVDEENR LIGLVTMQGI LQRREYDQAA RDGNGRLRCG VAVGPFETER
AIAADDAGAD VIFIDCAHAH NLDVVDTARD IKAEIDADIV VGNIGTREAA EDLVDFADGL
KVGIGPGSIC TTRIVSGSGM PQLSAVAEVA DVAADHDVPV IADGGIRYSG DAIKAIGAGA
DAVMLGSYFA GTDEAPGRII TRNGKKYKQY RGMGSVGAMK SGGGERYLKD VEDQEEEDYV
PEGVEAATPY QGPVENELHQ MVGGMQSGMG YVGAESVPEF QERAEFVRVS SAGQQENHPH
DVLITDEAPN YSPGE
|
|---|
| |