Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2587 |
Symbol | |
ID | 8384892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2652659 |
End bp | 2653810 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644973662 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003131482 |
Protein GI | 257053649 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.32423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTGA GTCATTCTGA TTCGGAGATG TCGACGGACG AACTGCAGTG GACCTACGAC GCGGAAGACG CCGTCGAGGT AACTCTCCGC GACAAGGCCC AGGAGTTCTA TCGGAACCGC ATCTACGAAC CGGGCATCGT CGTCCTCGAC GACTGGCGGT TCATCGCCGG TGGGCTCATC CTCCTCATGT ACGTCCTCGT CGCGACGATC GGCGTCTGGT TGGTTCCCTA TCCCGAGATC CATCTCACAC CGGAGCTGAA TCTGGCACCG GCTTTTAACT GGCATAGTCT AGTCAACATC GGCGGGTTCA ACCTCGCGTA CCCGACGTTC CACGATCTGT CGTACCCGCT CGGAACGACA AAGACTGGCC GATCCATCTT CGGACTCCTC GTCCACTCGA CGCCGAAGAT GATGATCATG GTCATCTCGG GCGGTGCCTT CGCGACCATC GTCGCGACGA TCCTCGGGAC AGTCGCCGGG TACAAGGGCG GCCGCGTCGA CGGAGCGATC TCGATGTTCA TCGACATCGC GATGACGATC CCGGGCCTCC CGCTCGTGAT GGTCCTCGCA CTCGCGTTCC AGGATCTGGA GGTCCTGGGG ATCGGCATCG GATTCGCCCA GCTCGGTCAG CTTCCGGAGC CGCTGAACGT CCTCAGGCCG GCGACCATCG GGATGATCAT CATGATCAAC TACTGGGGCG GTCTCGGACG GGCCATCCGC TCGCAGGTGT TGACGCTGCG CCAGGAGAAC TACGTCGAGG CGTCCCGGAC GATGGGCGTC AGTACCTGGA AGATCATCCT CAAGGACGTG ATCCCGAACC TGATGCCGTA CATCCTGATC AACTTCGTCA ACGCGGCCCG GTTCGTGGTC TTCTCGGCCG TTGGGCTGTA CTTCCTCGGC GTCCTGCCGA CGGACGTCGC CAACTGGGGC GTCATGATCA GCGACGCTTA CGGCCAGGGC GCGATCGCCG GGCTCAGCAT CTGGAACTGG CTGTTCCCGC CAGTTTTCGC CATGTTGTTC CTGGCGCTGG GACTGATCTT GCTCTCCCAA TCGCTGGACC GCGTCTTCAA TCCGCGAGTC CGGACGAAAC TGTCGTCGTT CGACGCCATT GATTCCGACG AGGACGACGT TGAGGAGGTT ATGAACGAAT GA
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Protein sequence | MKVSHSDSEM STDELQWTYD AEDAVEVTLR DKAQEFYRNR IYEPGIVVLD DWRFIAGGLI LLMYVLVATI GVWLVPYPEI HLTPELNLAP AFNWHSLVNI GGFNLAYPTF HDLSYPLGTT KTGRSIFGLL VHSTPKMMIM VISGGAFATI VATILGTVAG YKGGRVDGAI SMFIDIAMTI PGLPLVMVLA LAFQDLEVLG IGIGFAQLGQ LPEPLNVLRP ATIGMIIMIN YWGGLGRAIR SQVLTLRQEN YVEASRTMGV STWKIILKDV IPNLMPYILI NFVNAARFVV FSAVGLYFLG VLPTDVANWG VMISDAYGQG AIAGLSIWNW LFPPVFAMLF LALGLILLSQ SLDRVFNPRV RTKLSSFDAI DSDEDDVEEV MNE
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