Gene Huta_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2566 
Symbol 
ID8384871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2631055 
End bp2631948 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID644973643 
Productresponse regulator receiver modulated GAF sensor protein 
Protein accessionYP_003131463 
Protein GI257053630 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.247214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTA CAGTCTTATG CGTCGATACG GACGCTCGGA TTTCGACAGT CTCGACAGCA 
GTTGAGACTG AAGACAATCT CACTGCAATT GAAGCAAGAT CTGTCGAGGA TGCGTTGGAC
GTTATCGGCA GCGAACCGGT TGTTGGTGTC GTCACCGCGT ACGACCTCGC TGATGGAACC
GGGATGGATG TTATACAGGC AGTTCGTGAA CAGACTCCAC AGACGCCAGT TGTCCTCTTC
ACGGATGTTT CGCCGGCCGA AATCGATACG AACTCCGTCG AGGAGGTACT CGTCGAGTAT
CTCAACCGGG ATATCCCGGA TGCGACTGAC CGGCTGGGAT TTATCGTCAA CGACGTCATC
GATCATAGTG CCCAAGTTGG CTTTCTCACC CCCGACAACG AGGACGAACG ACTCGACGCA
CTCGACCAGT ATGACATCGA CTCATTGCCA ATCGAAGAGA GTTTTGAGCG CCTAACGGAC
CTCATCACGG CACACTTCGA TGTCGCAGTC GCGTTCGTTG GCCTCATCGA GGAGGACGAA
GAGAACTTCC TCGCCTGTAC CGGTGGGGAC TGGGACTCGT TGACGCGTGA AGATACGATC
TGTACGCACA GTATGCTCCA GGAAGACGTG ATGGTTGTCG AAGACATTGC CAACGATAAG
CGATTCAACA AAAACGAACA GTTGGAAAAC CTCGGCATTG TCTCCTACGC CGGGGCGAAC
ATGACCAGTT CCGATGGCCA CGTCATCGGG CAGGTGTGTG CTCTCGGGCA CGAGCCACGG
CGCTACACTG CGAAAGAAAA GCACGACCTC GAACAGTTCG CCGACACGGC GATGGAAATT
CTGGAACTGC GCCAGTCCGT CCTCGACAAT CAGGACGTGG AGGTCCACCA ATGA
 
Protein sequence
MDRTVLCVDT DARISTVSTA VETEDNLTAI EARSVEDALD VIGSEPVVGV VTAYDLADGT 
GMDVIQAVRE QTPQTPVVLF TDVSPAEIDT NSVEEVLVEY LNRDIPDATD RLGFIVNDVI
DHSAQVGFLT PDNEDERLDA LDQYDIDSLP IEESFERLTD LITAHFDVAV AFVGLIEEDE
ENFLACTGGD WDSLTREDTI CTHSMLQEDV MVVEDIANDK RFNKNEQLEN LGIVSYAGAN
MTSSDGHVIG QVCALGHEPR RYTAKEKHDL EQFADTAMEI LELRQSVLDN QDVEVHQ