Gene Huta_2558 details

Gene Information

• Locus tag: Huta_2558
• ID: 8384863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2624409
• End bp: 2625056
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973635
• Product: hypothetical protein
• Protein accession: YP_003131455
• Protein GI: 257053622
• COG category: [R] General function prediction only
• COG ID: [COG1326] Uncharacterized archaeal Zn-finger protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.237964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAT CTTCACAGCG AGTGGGGCTC CCCTGTCCGG CGTGCTCGCC GGATCTGGAG 
ACGGTCCACG AGGTGCTTTC GACTGGCGGG CAGGCAACGG TCCGATGTAC GGAGTGCGAT 
CACGTCCACA AGACGTCCCT CCCCGAGGAG CAGACGGTCC AGCGCGACGT TGTCGTCTCC 
CAGGACGGCG AATCATTCAA ATCGACGACG GAGCCGCCGG CCGAGGAGAC CCTGGCCGTC 
GGCGAGGAGT TCCTCTTAGA GACCGAGGAG GCGATCATGA CCGTCCGGAT CACGAGTCTC 
GAACTCGCGG AGGGTCGCGT CGAGGAGGCT CAGACCGAAG ACGTCGAGAC GATCTGGACG 
CGTGCGGTCG GCAACGTCGC CGTCAACGCG ACCGTCCACC CCAAGTCGGG TGGCCGCGAC 
GAGACCCGCA GCGAGCAGTT GCACGTCCCC GGCGACTACG AGTTCGTCGT CGGCGCGACC 
GACGACCTCG GCGACCTTTC CTTCACCGTT GAAGGCATCC ACCTCCGGGA CGACGCCGTC 
GGGTACCAAC ACGAGAAACT CGATCACGAC AACGACAAAG CCTTCGCAAA GGACATCAAC 
CGGCTGTATC TCCGCGACGA GACCAGCGAC GCCTGGTCGG CGTGGTGA 

 

Protein sequence

MSESSQRVGL PCPACSPDLE TVHEVLSTGG QATVRCTECD HVHKTSLPEE QTVQRDVVVS 
QDGESFKSTT EPPAEETLAV GEEFLLETEE AIMTVRITSL ELAEGRVEEA QTEDVETIWT 
RAVGNVAVNA TVHPKSGGRD ETRSEQLHVP GDYEFVVGAT DDLGDLSFTV EGIHLRDDAV 
GYQHEKLDHD NDKAFAKDIN RLYLRDETSD AWSAW