Gene Huta_2555 details

Gene Information

• Locus tag: Huta_2555
• ID: 8384860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2622230
• End bp: 2622739
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644973632
• Product: hypothetical protein
• Protein accession: YP_003131452
• Protein GI: 257053619
• COG category: [R] General function prediction only
• COG ID: [COG2405] Predicted nucleic acid-binding protein, contains PIN domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.214665
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGTCT TCGATGCGAC GCCGTTGATC TATCTCGCGA CTGTCGATCG ACTCGGGATG 
CTCACCGAGT TCGAAGACGA TCGATTGGTT CCAGAACGCG TCTACGACGA GGTCGTCACG 
GTCGGCCTCG ACGCGGGTCA CGCCGACGCC AGGCGCGTCG AGCGCGCCGT CGAGGACGAC 
GTACTGACTG TCGCGACGGT GGAACGAACG GCCTCCTTCG AACGCCTGGC AGCGAACGAC 
AGTCTCAGCG AGGCGGACGC CGCAGTCCTC GCGCTGGCAG CAGCCCGGGA CGGGACCGGT 
GTCATGGACG AACAGTACGG TCGCGACGTG GCCGCCGCCG AGGGGATCGA GACGCGGGGG 
ACGGCATACC TCGTGCTTCG ATCACTCAAG CGAGACGCGA TCACTGCCGA GGAGGCACGC 
GAGACCATCG ACGCGATGGT CGATGCCGGC TGGTACTGCG CGCCGGACTT ATATGCGAAA 
CTCCTTCGCC GCATCGAGGA TCTCGCCTGA 

 

Protein sequence

MYVFDATPLI YLATVDRLGM LTEFEDDRLV PERVYDEVVT VGLDAGHADA RRVERAVEDD 
VLTVATVERT ASFERLAAND SLSEADAAVL ALAAARDGTG VMDEQYGRDV AAAEGIETRG 
TAYLVLRSLK RDAITAEEAR ETIDAMVDAG WYCAPDLYAK LLRRIEDLA