Gene Huta_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2548 
Symbol 
ID8384853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2613769 
End bp2614779 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID644973625 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003131445 
Protein GI257053612 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAA GCGATCCGGT CCGCATCGGG ATCAACGGTT ACGGTCGAAT CGGCCGTTGT 
ACCCTTCGTG CAGCCCTGGA GAACGACGAC GTCCAGATCG TCGGTATCAA CGACGTAATG 
GACTTCGAGA AGATGGAGTA TCTCACGAAA TACGACAGCG CGTTGGGCAC CCTCCCCTAC 
GATGTCTCCC TCGAGGGGGA CTCGCTGGTC GTCGACGGCA ACGATATCGA TCTACTCAAC 
ATCCAGAACC CCGAGGAACT CCCCTGGGAC GACCTCGATG TTGACGTCGC GATCGAGTCG 
ACGGGTATCT TCCGAACGAA GGACGAGGCC AGTGCCCACC TCGACGCCGG CGCGGAGAAG 
GCGCTGATCT CCGCCCCGCC GAAGGGCGAC AAGCCCGTCC CGCAGTTCGT CTACGGCGTC 
AACGACGACG AGTACGACGG CGAGGACGTC GTCTCCGCCG CCTCCTGTAC GACCAACAGC 
GTCTCGCCGC CGATGCACGT CCTGCTGGAG GAGTTCGGCG TCGACGCTGC CGAGATGACC 
ACGATCCACG CCTACACGGG CAGCCAGGCC ATCGTCGACG GTCCCAAGTC CAAGACCCGG 
CGTGGTCGCG CAGCCGCCGA GAACATCGTC CCGACGACGA CCGGCGCGTC GACCGCGACG 
CCCGACATCC TGCCCGAGCT CGAAGGCAAG TTCGAGGCGA TGGCGATCCG CGTCCCGGTC 
CCGAGCGGTT CGATCACCGA GATCGTCGTC GACCTGCCCG GCAACCCGGA CGTCGATGAG 
ATCAACGCCG CCTTCGAGGA GTACGCGGCC GGCGAACTCG AAGGCTCGAT GGGCGTCACC 
GACGACCCGA TCGTCTCGCG TGACATCGTG GGCCAGCAGT TCGGCTCGGT CGTCGACCTG 
GGCAAGACCT CGACGGTCCA GGGTGGCAAG CTCGCGAAGA TCTTCGCCTG GTACGACAAC 
GAGATGGGCT ACACGTCCCA GATGATGCGG CTGGCCGAAG ACATCGTCTG A
 
Protein sequence
MSASDPVRIG INGYGRIGRC TLRAALENDD VQIVGINDVM DFEKMEYLTK YDSALGTLPY 
DVSLEGDSLV VDGNDIDLLN IQNPEELPWD DLDVDVAIES TGIFRTKDEA SAHLDAGAEK 
ALISAPPKGD KPVPQFVYGV NDDEYDGEDV VSAASCTTNS VSPPMHVLLE EFGVDAAEMT 
TIHAYTGSQA IVDGPKSKTR RGRAAAENIV PTTTGASTAT PDILPELEGK FEAMAIRVPV 
PSGSITEIVV DLPGNPDVDE INAAFEEYAA GELEGSMGVT DDPIVSRDIV GQQFGSVVDL 
GKTSTVQGGK LAKIFAWYDN EMGYTSQMMR LAEDIV