Gene Huta_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2495 
Symbol 
ID8384797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2569813 
End bp2570799 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID644973569 
Productcobalamin biosynthesis protein CobD 
Protein accessionYP_003131392 
Protein GI257053559 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.239005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGATCA TCGCGGCGGC CCCAGGCGAG TTCGTGGTTC GCATCCAGCC GGGGATCTGC 
GTCGCGCTCG CCCTCGCGCT GGACGGGGCT GTCGGCGAAC CGCCCGAATC GATTCATCCC 
GTCGCGCTGT TCGGTCGAAT GATCGCTCCC CTTGATCGCG AGTGGCCGTT TTCGCGGGCC 
GTGGGCACGT CGATCGCGCT GGCTGCTCCA CTCGCCGTCG CTTTCCTCGC CTGGCTGCTC 
GTCGAGTTTG CCACAACTGT CCCGGTCCTC AGCTCGATCG TCGCCGGCCT CGTTCTTTTC 
AGTACGCTAA GCCTCCGCCG GCTGCTCACG CGGGCCCGAG ACGTGATCGA TGTCAGCAGG 
ACAGATCTGG AGACGGCCCG GGAGCGCCTC CCCGCGCTGG TGGGTCGCGA CCCGAGTTCC 
CTCTCGCCGC CATTGATCCG GAGTGCCAGC GTCGAGAGTC TGGCCGAGAA TCTGGCAGAC 
GGGTTCGTCG CGCCGTTGCT CGCATTCACT CTCGGCGCGC AGCTCTCGCT GTCGGTCGGC 
GTCGCTGCCG CTGTCTGGAT CAAGGCGGTC AATACGCTCG ACTCGATGCT TGGCTACCGT 
TCGAAGCCCG TCGGCTGGGC GAGCGCGCGA CTCGACGATC TCGTGATGTG GCTGCCGGCG 
CGGACGACGG CTGTTTTGAT CGCGCTGGCG GCCCGTGATT TCGGGGCACT CTGGCGTGCC 
CGGGGATGGC GTGGCGCGCC CCCGTCGCCC AACTCCGGGT GGCCGATGGC GACGCTGGCT 
GCCGTACTCG ACACCCGGTT CGAGAAGCCC GGCGTGTACG TACTCAACCC GGATGCAACG 
CTACCCGACG CAGCGGCGGC GACGCGAGCG ATTCGGATCG TGGCGATCGC GGGGACCATC 
GCCGGCGCGA TGTCACTCCT CATCGCGTCC GTTCAGCTCA GTCCTGGCTC ACTCGGACTC 
GTCGCCGTGG GGGTGGGGTC ATGTTGA
 
Protein sequence
MTIIAAAPGE FVVRIQPGIC VALALALDGA VGEPPESIHP VALFGRMIAP LDREWPFSRA 
VGTSIALAAP LAVAFLAWLL VEFATTVPVL SSIVAGLVLF STLSLRRLLT RARDVIDVSR 
TDLETARERL PALVGRDPSS LSPPLIRSAS VESLAENLAD GFVAPLLAFT LGAQLSLSVG 
VAAAVWIKAV NTLDSMLGYR SKPVGWASAR LDDLVMWLPA RTTAVLIALA ARDFGALWRA 
RGWRGAPPSP NSGWPMATLA AVLDTRFEKP GVYVLNPDAT LPDAAAATRA IRIVAIAGTI 
AGAMSLLIAS VQLSPGSLGL VAVGVGSC