Gene Huta_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2453 
Symbol 
ID8384755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2530065 
End bp2530901 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID644973529 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003131352 
Protein GI257053519 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.719818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACC ACATCGCCCT CATTACCGGC TGCTCCTCGG GCATCGGCCG GGCGAGCGCC 
GAACGCTTTC TCGAAGAGGA CTGGACGGTC TACGCGACCG CCCGTGACAC CGACGATATT
GCCGACCTCG CCGACGCCGG GGCCGAAACA GCCAAACTCG ACGTGACCAA CGCCCGCGCC
GTCGAGCGGG TCGTCGACCG GATCATCGAC GAAGAAGGCC GGATCGACTG TCTGGTCAAC
AACGCGGGCA CCGGTCAGTT CGGCCCGATC GAGGACGTCC CGACCGATGC CCTCCAGGAC
CAGTTTGACG TCAATCTCTA CGGTCCGCAC CGCCTGATCC GAGCGGTTCT GCCGCACATG
CGCGAACAAG CGGAGGGGAC GATCGTCAAC GTCTCCAGCC TCCAGGGTCG GCTCGCCGTC
CCTGGCATGG GAGCCTACGC GGCCTCGAAG TTCGCCCTGG AGGCGATGAG CGATTCCCTC
CGAGCTGAGG TCGATTCCCA CGGCGTCGAC GTGGTCGTCG TCGAACCGGG CGTCGTCGAG
ACGTCGTTTG CCGACCGGAC CGACGCGAGC CGCGAGCGTC TCGAACAGTC GGGCGCGTAC
GACGGGATCT ACGAGGCCCA GGACGATCGC CGGGCGATCG AGTACGACGG CGTCTTCGGG
ATCCCGCCCG AGGATGTCGC AACGGTGATC TACGACGCCG CGGCGATGAC CGATCCCGAT
CCCCGCTATG CGGTGGGCAA CGGCGCGAAG TTGATCCTGG CGTTGCGATA CCTTCCCGAT
CGCTGGCGCG ACGCCGCCTT CGGCTTGTTC CAGCGCGTAG CGGGTCTTCG CCGATGA
 
Protein sequence
MEDHIALITG CSSGIGRASA ERFLEEDWTV YATARDTDDI ADLADAGAET AKLDVTNARA 
VERVVDRIID EEGRIDCLVN NAGTGQFGPI EDVPTDALQD QFDVNLYGPH RLIRAVLPHM
REQAEGTIVN VSSLQGRLAV PGMGAYAASK FALEAMSDSL RAEVDSHGVD VVVVEPGVVE
TSFADRTDAS RERLEQSGAY DGIYEAQDDR RAIEYDGVFG IPPEDVATVI YDAAAMTDPD
PRYAVGNGAK LILALRYLPD RWRDAAFGLF QRVAGLRR