| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2351 |
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| Symbol | |
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| ID | 8384650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2394201 |
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| End bp | 2397176 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644973424 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003131250 |
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| Protein GI | 257053417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.248597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTCG AAGGGTCTGG TGAGATCACT GTCCTGCACG TCGACGACGA CCCGGACCTC
GCGGCGGTCG CCGGCGAGTA CGTGGCGCGT GAGGACGACC GGATATCCGT CGACGTTGCG
ACCAGCGCCG ACGAGGGCCT CACGATGCTC GCCGACGCGT CGATCGACTG TATCGTCTCG
GACTACGACA TGCCCGGCCA GGACGGCATC GAGTTCCTCG AAACAGTCCG CGAGGCACAC
CCGGACCTTC CGTTTATCCT GTACACGGGG AAGGGATCAG AGGAAGTCGC CAGCGACGCG
ATCGGCGCTG GCGTGACGGA TTACCTCCAG AAGGAGTCCG GCCCCGACCA CTACCGACTC
CTGGCCAACC GGATCGTGAA CGCGGTCGAG CGATACCGGG CGGGCGAGCG CGTCGAGCGG
GCCGAGCAGC GCTATCGATC GCTGTTCGAG GAGATGAACG AGGGGGCGGC GTTGCACGAA
CTCGTCTACG AGGCGGGCGA GCCGGTCGGG TACGAGATCA TCGACGTCAA CCGGAACTTC
GAGGCGATCC TCGACATTCC GGCCGAGCAG GCCATCGGCC AGCGTGCGGT CGACGTCTAC
GACGTCGAGG AGCCGCCGTT CCTCGACCGG TACGCTCAGG TGGCCGAGAC GGGCGAGTCG
ATGGAGTTCG AGACCTCCTT TCGGCCGCTG GAGATGCACT TCCACGTCTC GGTGTTTGCA
CCGAGAGAAG GCCAGTTCGC GACCGTGTTC TCGGACGTGT CCGACCAGCG AGAGACCGAA
CAGCACCTCC GCCACGAGCG GGCGTTGTAC CACGCCCAGA GCGAGGCCAC CCTCGATGGG
TATCTCGTCG TCGACGAGGA GCGCCGCATC GCCTCGTACA ACTCCCGGCT GCTCGAGTTG
TGGGACATCC CCGAGGATCT CATCGAGAGT CGAGACGACG AGGCGGTCCT CGATCACGTG
GTCGAGAAAA CGGTCGATCC CGATGAGTTC CGCGAGGTGG TCGAGTCGCT CTACGACCAG
CCAAACGCCG AGAGCAGAGA CGAGATCGAA CTGGCCGACG GGCGCTGGTT CGACCGGTAC
TCGACGCCGG TCGTCGGCGA GGACGGAACC CGCTACGGCC GACTGTGGGT CTTTCGGGAC
GTCACCCAAC GCAAGGAACG CGAACGCGAG CTGACCCGAC TCTCGGAACG ACTCGAACTC
GCCGTCGAAG GGGCGAATCT GGGAGTCTGG GACTGGGATA TGACCACTGA CGCGGTCGAG
TTCAACGAGC AGTGGGCCGA GATGCTCGGC CACTCGGTAT CGGAGATCGA ACCACACCTC
GACGCCTGGG AACGGCGGGT TCACCCTGAC GACCTCCCGG CGGTCGAGGC GGCACTCGAC
GCCCACATCG AGGATGAAAC ACCGCTGTAC GACACCGAAC ACCGGATGCG GACGGCCGAG
GGCGACTGGA AGTGGATCAG GGACGTCGGC CGGGTCGTGG ATCGCGGCGG GGACGGGGAA
CCACGTCGCG CGGTCGGTAT CCACATCGAC ATCGACGACC GGAAGCGACG CGAACGGCAA
CTGCAGTTGT TCCGAAAGGC GGTCGAACAG ACCGCCCACG CCGTCTACGT TACCGACGCC
GACGGGACGA TCGAGTACGT CAACCCGGCC TTCGAGGACG TGACCGGGTA TCCCGAACAA
GAGGCGCTGG GCAGCGATCC ACACATCCTC CAGTCCGGGG AGTACGACGA GGACTACTAC
GAGGCGTTCT GGGAAACGAT CACTGACGGC GAGCGCTGGC GCAAGGAGAT GATCGACCGA
GACGCCGACG GCGAGCGGAT CGTCCTCGAA CAGTCGATCG CGCCGATCAC GGACGCGGAC
GGTGACCCGG AGAAGTTCGT CGCCGTCGCC CAGGACGTCA CCGAGCGCAA GGAGGCCGAA
CGCGACCTCG AGCGCGCTCG CGAGGAACTC CGGCAGGTCA TCGATCTCGT GCCGGATCTC
ATCTTCGCGA AGGACCGCGA GGGACGGTAC TTGCTGGCCA ACGAGGCGAC TGCCGAGGCG
TACGGGCTCT CGCCCGAGGA TGTCGAGGGC GAGCTCGAAT CGAACGTCAT CCCGGACGTG
GAGGATTCCG AAGCGTTCCG CGAGGACGAC CTCGCCGTGA TCGAATCGGG CGAGCGCCAG
GTGATCCCCG AAGAAGAACT GACGACCGCC GACGGCGAGA CCCGGATTCT GGAGACGACG
AAGATCCCCT ACGAGGTCTC GGGCAGCGGC GAGGACGCCG TCCTCGGGTA CGGGCGGGAC
ATCACGGATC TCAAAGAGTA CGAACGGGAA CTCGAGCGCC AGCGGGACAA CCTCGAAGTG
CTCAATCAGG TCGTCCGCCA CGACATTCGC AACGAACTGC AACTCGTCGA GGCCTACGCG
GACCTGCTCC AGCGACACGT CGATGGCGTG GAGGAAAACT ACGCAAACAG AGTTCTCAGA
GCCGCCCGTG GTGCCGCCGA CATCCTCGAG ACTGCCCGAG ACGTGACGGA TATCATGCTC
CAGGCCGACG CCGATCAGCA GCCGGTCGAC CTCGCGAGCA CCCTCCGGAA CGAGGTCGAG
GACCTCCGAT CGCAGTACGA ACGGGTGGCC GTGACCGTCG AGGGGGCGAT TCCGGACGTT
TCAGTCCGCG CCGACGACAT GCTCGCGTCC GTCTTCCGGA ACCTGCTGAC CAACGCCGTC
CAGCACAACG ACAGCGAGAG CCCGGACGTG ACTGTCGCCG CCGACACCGA CGGGGAGCGC
GTGACGGTTC GGATCGCCGA CAACGGGCCG GGGATCCCAG AGGAACGCCG GGAACGTATC
TTCCAGCAGG GGGAAACCGC CCTCAACAGC GACGGGACGG GACTCGGGCT GTATCTCGTC
GCGACGCTTG TCGAGCGCTA CGGCGGGACG GTCGCCGTCG AGGACAACGA TCCCACCGGA
GCCGTGTTCG TCGTTGAACT GCCGATGGCA GCGTGA
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| Protein sequence | MPVEGSGEIT VLHVDDDPDL AAVAGEYVAR EDDRISVDVA TSADEGLTML ADASIDCIVS
DYDMPGQDGI EFLETVREAH PDLPFILYTG KGSEEVASDA IGAGVTDYLQ KESGPDHYRL
LANRIVNAVE RYRAGERVER AEQRYRSLFE EMNEGAALHE LVYEAGEPVG YEIIDVNRNF
EAILDIPAEQ AIGQRAVDVY DVEEPPFLDR YAQVAETGES MEFETSFRPL EMHFHVSVFA
PREGQFATVF SDVSDQRETE QHLRHERALY HAQSEATLDG YLVVDEERRI ASYNSRLLEL
WDIPEDLIES RDDEAVLDHV VEKTVDPDEF REVVESLYDQ PNAESRDEIE LADGRWFDRY
STPVVGEDGT RYGRLWVFRD VTQRKERERE LTRLSERLEL AVEGANLGVW DWDMTTDAVE
FNEQWAEMLG HSVSEIEPHL DAWERRVHPD DLPAVEAALD AHIEDETPLY DTEHRMRTAE
GDWKWIRDVG RVVDRGGDGE PRRAVGIHID IDDRKRRERQ LQLFRKAVEQ TAHAVYVTDA
DGTIEYVNPA FEDVTGYPEQ EALGSDPHIL QSGEYDEDYY EAFWETITDG ERWRKEMIDR
DADGERIVLE QSIAPITDAD GDPEKFVAVA QDVTERKEAE RDLERAREEL RQVIDLVPDL
IFAKDREGRY LLANEATAEA YGLSPEDVEG ELESNVIPDV EDSEAFREDD LAVIESGERQ
VIPEEELTTA DGETRILETT KIPYEVSGSG EDAVLGYGRD ITDLKEYERE LERQRDNLEV
LNQVVRHDIR NELQLVEAYA DLLQRHVDGV EENYANRVLR AARGAADILE TARDVTDIML
QADADQQPVD LASTLRNEVE DLRSQYERVA VTVEGAIPDV SVRADDMLAS VFRNLLTNAV
QHNDSESPDV TVAADTDGER VTVRIADNGP GIPEERRERI FQQGETALNS DGTGLGLYLV
ATLVERYGGT VAVEDNDPTG AVFVVELPMA A
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