Gene Huta_2308 details

Gene Information

• Locus tag: Huta_2308
• Symbol: rpl6p
• ID: 8384606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2349092
• End bp: 2349628
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973381
• Product: 50S ribosomal protein L6P
• Protein accession: YP_003131208
• Protein GI: 257053375
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03653] archaeal ribosomal protein L6P

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGAA CAGAACTACA GCTACCGGAA GACGCGAGCG CCGAGATGGA CCATCTCGAG 
CTCACCGTCG AAGGACCCGA AGGCAGCGTC ACGCGCCGGT TGTGGTATCC GGACATCACC 
GTCGAGGTGA CCGACGACGC CGTCGTCATC GAGTCCGACG AGGGCGATGC GAAGACGATG 
TCGACGATCG GGACCTTCGA GAGCCACGTG CGGAACATGT TCCACGGCGT CACCGAGGGC 
TGGGAGTACG AGATGGAAGT CTTCTACTCT CACTTCCCGA TGCAGGTGCG CGCCGAGGAT 
AGCGAGATCG TCATCGAGAA CTTCCTCGGC GAGCGAGCGC CGCGGACGAC CCCGATCCAC 
GGGGACACCG AGGTCGAGAT CGACGAGGAA CGGCTCACGT TGCGTGGCCC CAGTATCGAG 
GATGTCGGCC AGACGGCGGC CGACATCGAG CAGCTCACCC GTGTCCCGGG CAAGGACGTC 
CGGGTGTTCC AGGACGGCGT CTACATCACG GAAAAGCCGA ATCGAGGTGA GGCCTGA 

 

Protein sequence

MPRTELQLPE DASAEMDHLE LTVEGPEGSV TRRLWYPDIT VEVTDDAVVI ESDEGDAKTM 
STIGTFESHV RNMFHGVTEG WEYEMEVFYS HFPMQVRAED SEIVIENFLG ERAPRTTPIH 
GDTEVEIDEE RLTLRGPSIE DVGQTAADIE QLTRVPGKDV RVFQDGVYIT EKPNRGEA