Gene Huta_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2142 
Symbol 
ID8384436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2188400 
End bp2188867 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID644973211 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003131042 
Protein GI257053209 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACACG ACGTGGAACT GCGAGCCCTC CAGATCAACG CCGACGAGCG TGGCACGCTC 
ACGGAGATCT GGCGGTCGGA CTGGGACTTT TTCGCGGGCG AGGACGAACC GACGATGAGC 
TACCTTTCGG AGTCGTATCC GGGTGTCGTC CGGGCGTGGC ACCGCCACGA GCGCGGCCAG 
ATCGACCACT TTGTCGTCCC CCATGGCAAC GTGAAGGTCG GGATCTACGA CGACCGCGAG 
GACTCACCAA CACAGGGTGA ACTGGACACG TACGTCATCG GCGAGGACAA CCCGACGGCG 
ATCAGAGTGC CGGGGGAGTG CTGGCACGGA TTCAAGGTGA TCGGCGACGA GCGCGCGACG 
TTGATCAACT TCCCGACGAA CCTCTACGAT TACGAGGATC CCGACGAGCA GCGCCTGCCG 
CCGGACACCG ACGAGATCCC GCTCGACTGG GACGAACAGC CACACTGA
 
Protein sequence
MIHDVELRAL QINADERGTL TEIWRSDWDF FAGEDEPTMS YLSESYPGVV RAWHRHERGQ 
IDHFVVPHGN VKVGIYDDRE DSPTQGELDT YVIGEDNPTA IRVPGECWHG FKVIGDERAT 
LINFPTNLYD YEDPDEQRLP PDTDEIPLDW DEQPH