Gene Huta_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1946 
Symbol 
ID8384239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1971033 
End bp1972730 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content65% 
IMG OID644973016 
Producthypothetical protein 
Protein accessionYP_003130848 
Protein GI257053015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA CGCGTCGTGC GGTGTTCGCG CTGGGTACCG TCGTCTGCCT GATCGTGGTC 
GCCAGCGCGC TTCCGGCCGC AGATCCACGA CTCGACCCGC CTGGATCGCA AGGCGAAGAT
GTTGTCCCAG GGGAATGGGA TTCGGGCGAC GAGCGATCGG ACATCCCAAC CGAGTCGACG
AACCAGTCCA CCTCGACGGA GCAGGCAGAT AGCGAGGCGG ACGACGAGGA ACAAATCGAT
ATTCTCGACT CACCTGTTCC GGGAACCCAG ATGACCGTCA AGACCGAAAG TAGCGGATCC
ACGCGGACGG ACAACGTCAC CGTCGACGGT GAGGTTGTTG GCGAAACCAG CCGGCACGGA
AAGGTCGAGG TCGAGGTGCC CTTCGAGGAG TCGATGACAA TTTCCGTCGA GGGCAAAGAC
GTGAACCGTA CTGTCGACAT CGAAACGGAT GCGACGATCC ACAAGCGGTC GGCGGCAGCG
CCGGCTCGCA ATCTCTCGAT CACCGCCGCT GTCGCGACGG AGCCACTCGT CGGCGCGCCA
GTACGTGTCG ACGATGAAGT GGTCACGTGG ACCGATGACG ACGGGGACGC GGCGGTCCCG
TTACCCGACT CGCCGGGTCC GGTCGAAATC AGTGTCGTGC GGCGTGCAGT CAGGGCTGAA
CGAACCGTCT CGGTCACGGA ACCAACGGTC GATTTTGCCA CACCCGTGTT GTTCCCCGGG
TTCCCCGCTC CGGTGGTCGT TTCGGCCGAC GGCGAGCCTA TCGAAAACGC AACCGTCCAG
ATCGGCGGTT CCGTAGCCGG AACGACCGAC AGAAGCGGTC GGACGACGGT CTGGCTGCCG
ATCGAAGATT CAGCCACCGT GACGGCGACA GTCGGTGCGG CATCGGCAAC GGCAACGGTC
GGCAACCTCT ATTTCCGGCT TGCAGCCGTT GTCGTTGTGG TTCCCGGGCT CATCATCGGC
GGCGTCCTGT CGTATCTCAA ACTCGTCGCA CTCCGCAAGC GGCGTCGGGC CAAGGGGTTC
GTCAAAGTCT TTGTCGGATT TGGCACTGTA CTCGCAGGAC TCTCCGGTTC CGCTGGCCGT
CTGTGGGGCT TGTTGGGCAA CTGGCGTCCC TCCGTCCCGG CGATTTCACG CCCGTCGCTG
TCCGGTTTCG GCGAGGGGTG GCAGTTCCCT GCCGTCGGGG CGACGTTCAC GGCAGCGTCC
CTGGGCGGGA TCACGGCGAC ACTGTCGTCG TTTGGGTCGC TTCGAAGAGT CGTCAGTGGC
TCGCCGGATC GTACGGGAAC CGAGCGGTCG CCGAGCAGTC GGATCGTCGA ATGGCTCAGT
GACGACGAGA CCAACACAGT CGACGACGAT GCAGACGAAG CGACGGCAGG CACGGACGAG
CCACCCCCCT CGCTCACCCC AAGAGAGGAG ATCCGCGCAG CGTGGCACAG TTTCCTGGAT
CGGCTCGACA TACGAAGGCG CGAGACGGTA ACGCCCGGGA CGGTCGCACG TCGGGCCATC
AGGACCGGGT TCCCGGTCGA CAGCGTCCGG CGACTCCTGG GGATTGTCCG TGCGGTCGAG
TACGGTGGTC GGGAGCCCTC ACCGGAGCGC GTCACCAGCG CCCGGGCGCT CGCTGAGGAG
TTGATCGCCT TCGAGACAGA GCAGGGCGAC GACCAACCCC GTGCGGACGG CGACTCAGAC
GAGGTGAGTG ACGAATGA
 
Protein sequence
MTDTRRAVFA LGTVVCLIVV ASALPAADPR LDPPGSQGED VVPGEWDSGD ERSDIPTEST 
NQSTSTEQAD SEADDEEQID ILDSPVPGTQ MTVKTESSGS TRTDNVTVDG EVVGETSRHG
KVEVEVPFEE SMTISVEGKD VNRTVDIETD ATIHKRSAAA PARNLSITAA VATEPLVGAP
VRVDDEVVTW TDDDGDAAVP LPDSPGPVEI SVVRRAVRAE RTVSVTEPTV DFATPVLFPG
FPAPVVVSAD GEPIENATVQ IGGSVAGTTD RSGRTTVWLP IEDSATVTAT VGAASATATV
GNLYFRLAAV VVVVPGLIIG GVLSYLKLVA LRKRRRAKGF VKVFVGFGTV LAGLSGSAGR
LWGLLGNWRP SVPAISRPSL SGFGEGWQFP AVGATFTAAS LGGITATLSS FGSLRRVVSG
SPDRTGTERS PSSRIVEWLS DDETNTVDDD ADEATAGTDE PPPSLTPREE IRAAWHSFLD
RLDIRRRETV TPGTVARRAI RTGFPVDSVR RLLGIVRAVE YGGREPSPER VTSARALAEE
LIAFETEQGD DQPRADGDSD EVSDE