| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1873 |
|---|
| Symbol | |
|---|
| ID | 8384164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1876596 |
|---|
| End bp | 1878608 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644972942 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003130776 |
|---|
| Protein GI | 257052943 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGAC GCCGCTTTCA TCTCGCGACG CTCACGATCG CAATCGCCGG CGCACTCGCC
GTCTGGCTCG TCTCGACGAA CCTCTTTCCA TACCATTCAC TGAATCACGA CGAGGGCGTC
TACCTCCAGC AGGCCGCGAT GCTGCTGGAG GGCAAACTCA CCCTCACCCC GCCCGTCGAG
GGCGTCTTCC GGCCGTGGTT CTTCGTCGAG AGCGAGGGGT TCTACCCGAA GTACAACCCA
GTCCCCGCGG GGATGTTCGC CCTCGGGGAA CTGCTCGGGG GCTATCGGCT GGCGCTGCCC
GCCATCGCGG CCGGGATCCT CGCGGGCGTC GCGGGTGTCG TGAGCGAAGT GTTCGACCGC
CGGACCGGCC TGCTCGCCGC CGTCTTCGTG CTCGCCTCCC CCCTCTTCCT CCTCGATACC
GCAACCTTCC TGCCGTACGC GCCGACGACG CTGCTGAATC TGGCCTTCGC CTACGGGTAC
CTTCGGGCAG ACCGGACCGG CGACTGGCGG TGGGCAGCGG CGGCAGGTGC GGCGATCGGC
CTCGCCTTTT TCGCCCGACC GTACACCGCC GTCCTGTTCG CCACGCCGTT CGTGGCTCAC
GCGCTGTGGA CGCTCGCCTG GGACTGGCGG ACGGCGATTC CCCGGCAGGC GGCGACCGCC
GCGCTGGGGC TGGTCGGCGT CGGACTAACC CTCGCGTATA ACGCCGCCGT CACCGGATCA
CCCCTGACGT TCCCCTACGA GGCCTTCGCC CCGCTGGACG GCCTCGGGTT CGGGCATCGC
GAACTCCTCA ACCACGGCGT CGAGTACACG CCCGGCCTCG CCGCCGAGGC CAACTGGAAC
GTCCTCGCGA CGTTCGTCGA CCGCTGGATC GCCGGCGGGA TCGTCGGCGC GGCCCTCGGG
ATCGCAGGCC TCGCCGTGGC GGCCCGGCGA GGGCTGGACG CCAGGCAAGC CACCCTGGCG
GCCGTCGGCG TCTCGGTCCC GGTCGGGAAT CTGTACTTCT GGGGGAACTA CAACCTGCTC
GGCGACCTCG ACGCGGCCGG TGACGGCCTG ATCGCCTCGC TAGGTCCGTA CTACCACTTC
GACCTGCTGG TCCCGACGGC CGCCTTCGGG GCCGTTGCCG CACTGGCTGC GTTCGACGCC
ATCAGTGAGG CACTGCAGGC TCGCCTCGAC CGCCGAACGG CGCTGGCAGC CCTCGCCGCG
ATCACCCTCG TGAGTACGCT CGTCCTCGGC GGGATCACGG CCGGTGGGGC AGCCGCGCCC
GTCGAGCGCA ACGTCGACGT GACCGACACC TACGAACTGA CCTACGCGCC CTTCGAGCCC
GAACCACCGG CCAACGCCGT CGTCCTCACG CCGACGCCCT ACGGCCCCTG GCTCAACCAC
CCCTTCCAGG CGCTGCGGAA CGATCCGGGC TACGACGGCC GGACGGTCTA CGCGATGGCC
GACCGCCCGT TCGCGATCGC CGACGCCTTC CCGGACCGGG ATCTCTACCG GTTCGGCTTT
CGGGGCGTCT GGGACCCGCT CGGCGACTCG CCGGAAGCCG CCCGACTCCA GCGCGTCCAA
GAGCGAACAG GTGAGACCGT CACCCTGAAC GCCAGCGTCG GCCTCCCCGA GCGCGTCACG
AGCGCGACCG TCACCGTCGA GACCGACGAC GGCACGGCCC ACTACGTCCC GAGAGAGACT
GGCGACGAGT TGCAGTTCCG GCTCGTCATC GGCGACACCG TCCGAGCGGT CGGCCTGCTC
GAAGCCGGCA GCGAGGAACA GCCTGCGATC GACGGACGTG AGGCGGTCGA CGTGACGGTC
TTCGCCGACG ACGGGGTGGG CGGGTTCGAA TACCGGCTGT CGGTTCCAGT CGAAGCCGAG
GGCGGACAGG TGCGCGCGCT GACCCCCCGC GTCGAATACT GCTTCGACGC CCAGGCCTGC
GGTGGCGCGG CGACGTACGT GCCCGAAGAA TCACCCGACG GGGTATTCGT CCGGACAGAA
CTGCGAGCGA CGAACGAGAC ACAGGAACCC TGA
|
|---|
| Protein sequence | MDRRRFHLAT LTIAIAGALA VWLVSTNLFP YHSLNHDEGV YLQQAAMLLE GKLTLTPPVE
GVFRPWFFVE SEGFYPKYNP VPAGMFALGE LLGGYRLALP AIAAGILAGV AGVVSEVFDR
RTGLLAAVFV LASPLFLLDT ATFLPYAPTT LLNLAFAYGY LRADRTGDWR WAAAAGAAIG
LAFFARPYTA VLFATPFVAH ALWTLAWDWR TAIPRQAATA ALGLVGVGLT LAYNAAVTGS
PLTFPYEAFA PLDGLGFGHR ELLNHGVEYT PGLAAEANWN VLATFVDRWI AGGIVGAALG
IAGLAVAARR GLDARQATLA AVGVSVPVGN LYFWGNYNLL GDLDAAGDGL IASLGPYYHF
DLLVPTAAFG AVAALAAFDA ISEALQARLD RRTALAALAA ITLVSTLVLG GITAGGAAAP
VERNVDVTDT YELTYAPFEP EPPANAVVLT PTPYGPWLNH PFQALRNDPG YDGRTVYAMA
DRPFAIADAF PDRDLYRFGF RGVWDPLGDS PEAARLQRVQ ERTGETVTLN ASVGLPERVT
SATVTVETDD GTAHYVPRET GDELQFRLVI GDTVRAVGLL EAGSEEQPAI DGREAVDVTV
FADDGVGGFE YRLSVPVEAE GGQVRALTPR VEYCFDAQAC GGAATYVPEE SPDGVFVRTE
LRATNETQEP
|
|---|
| |