Gene Huta_1771 details

Gene Information

• Locus tag: Huta_1771
• ID: 8384057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1779206
• End bp: 1781215
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644972837
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_003130676
• Protein GI: 257052843
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTGGC AAACGTCCTG GATGATCGTC CCGCTGCTGA TCGCGGCATT CTTGCTGCTG 
GTGCTCGGTC TGTCGATGCT ACTGTTGGTA ACGCGCGAGC GCATGACGCC GACCATCGGG 
GCGCTCCTCG TCTTCTGTCT GGCGGGTGCC ACCTGGGCGA TCGCCGAGGC CTATCAGGTG 
GCCAACACGG GCGCAAGCAA GCGCATCTGG TTTGCCATCG GTTCAGGGTC GTTCGTCGTG 
GTCGTGTTCG CCTGGCTCGT CTTTGCGCTG GCAGCCAGCG AGCGCGAGCG ATGGCTTTCC 
CTGCCGCGGA TCGCCCCGGT GTTGGCAGGG GGTGGCGTGC TGGCGGGGCT GTTCTTCACG 
AACCCGATTC ATGGCGCTCT CTGGGAGTCG ACTATCGTTT CGAGGGCGGG ACTGTTCGTG 
CTTGACGTTC AGTTCACGGC AATCTACGGC GGTGCCATGC TCGGTTTGCT GACGGTGACT 
GGTCTCGGGA TCGCGGTCCT GTGGGTCTAC GGAACCCAGC GCGACGGCGT CAGCTTGCGC 
GCCATCGGGT GGATGGTCGC TGGCATCTCC TTCCCGGTCG GGACGGGGCT GTTGTACCAC 
GTGGGACTCG GTCCCGGGGT GAACCTCACA CCGATCGCGC TGGGGGGTAC CGCGAGTACA 
CTGATCTACC TCGTGTTCAC CAGGGAGTTG ATCGGTCGCG TGCCGCTCCC GCGTTCGGCT 
GTGCTGAATC GCATGGACGA GGGACTGGTC GTCGTCGGCG CGGACGGTCA TGTGAGCGAC 
CTGAATCCGG CAGCGAAGTC GTTGCTGGAT CTCGAGGAAA CGGCGCTCGG ACGGACCGTC 
ACGGACGTCA TCCCCGAGTG GCCGGACGGC GTAGACGACG ACCGAACCAC GGTTGATGTC 
ACCGTCGAAG ATGGCGACCG CCGACACCTC CGGATTCGCG TGTCGCCACT GTCGGATAGT 
CACCACTCAC AGATCGGGCT GATTTCCGAC CGGACCGAAC AGGAGGCACT CCAGCAGCGC 
TACCGGGCCA TCATCGAGGA GTCCGCCGAA GCGAACGTGT TGCTCGACGA GAACGGCACC 
ATCATATACG CGAGTCCGTC CGTCGAGCGC ATCTTCGGGT GGACGTCGAC CGAGATGGAG 
GGCGAGACGG CCTTCGAGTT CGTCGCCGAG ACGGACCGCG AGCGGATCCG TGCGGAGTTC 
GAACGGGTCC TGGCAAATCC GGGCTATGAA CCCCGACTCG AGTACCGCGT CGTCGATCGC 
GAGGGTCACG AGTGCGTCTT CGAATCCCTG GTTCGCAACC TCCTCGATCA TCCTCACGTC 
GAGGCCATCG CTGTCACCTC GCGGGACGTC ACCGAGCGTC GGGAGCGAGA ACAGGAACTC 
GAGCGGATGA ACGAGCGCCT CGAGGAGTTC GCCTCGATAC TGAGCCACGA TCTCCGCAAT 
CCGCTGGAAG TGGCGGAGAT CCACACGACC CTGGCACAGC GTGGTGACGA GGACGCCCTC 
GAAACCGTCC AGCAGGCTCA CGACCGCATC GACGCCATGA TCGACGACAT TCTGACGTAC 
GTTCGCGAGG ACGACACTGT CGACCCGGAC GAGATCGCTT TCGAGCCCGT CGTCCAGTCC 
GCCTGGGAGA CTGTTCACAC CCGGGGAGCC ACGCTGTCGT TCGACATGCC GGCCGAGACG 
GTCATCGAAG CCGACCGGCG ACGGCTCCAG CGCGCACTCG AGAACCTCTT CCGAAACTCG 
ATCGAGCACG GGGGTGAGGC GGTGACCGTC CGGATCGGTC GGGCCGACGC GGGCTTTTTC 
GTCGCCGACG ACGGTCCAGG AATTCCACCC GAGGATCGCG CATCGGTCTT CGACAACGGG 
TTCACCACCG CCGAGGAGGG CACGGGTCTC GGACTGGCGA TCGTGCGCCG GACGGCCCAG 
GCTCACGGGT GGACTGTCAC GGCGACCGAG AGTGAGTCGG GCGGCGCACG CTTCGAATTC 
GGCAACGTTT CGTTCCCGAG CGAAGACTGA 

 

Protein sequence

MAWQTSWMIV PLLIAAFLLL VLGLSMLLLV TRERMTPTIG ALLVFCLAGA TWAIAEAYQV 
ANTGASKRIW FAIGSGSFVV VVFAWLVFAL AASERERWLS LPRIAPVLAG GGVLAGLFFT 
NPIHGALWES TIVSRAGLFV LDVQFTAIYG GAMLGLLTVT GLGIAVLWVY GTQRDGVSLR 
AIGWMVAGIS FPVGTGLLYH VGLGPGVNLT PIALGGTAST LIYLVFTREL IGRVPLPRSA 
VLNRMDEGLV VVGADGHVSD LNPAAKSLLD LEETALGRTV TDVIPEWPDG VDDDRTTVDV 
TVEDGDRRHL RIRVSPLSDS HHSQIGLISD RTEQEALQQR YRAIIEESAE ANVLLDENGT 
IIYASPSVER IFGWTSTEME GETAFEFVAE TDRERIRAEF ERVLANPGYE PRLEYRVVDR 
EGHECVFESL VRNLLDHPHV EAIAVTSRDV TERREREQEL ERMNERLEEF ASILSHDLRN 
PLEVAEIHTT LAQRGDEDAL ETVQQAHDRI DAMIDDILTY VREDDTVDPD EIAFEPVVQS 
AWETVHTRGA TLSFDMPAET VIEADRRRLQ RALENLFRNS IEHGGEAVTV RIGRADAGFF 
VADDGPGIPP EDRASVFDNG FTTAEEGTGL GLAIVRRTAQ AHGWTVTATE SESGGARFEF 
GNVSFPSED