Gene Huta_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1588 
Symbol 
ID8383867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1561897 
End bp1563096 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content64% 
IMG OID644972650 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003130496 
Protein GI257052663 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAGATA GACGACTACT ATCGGTTGTC CAGAAGTTGC TCGACAGTGC AGGCACCGAG 
TACCGATATC ACGTCATTTA CTTCTCGTAT TACTTCGCGT TGAACGGGAT GGTGACGTTC
AGAAACGCCT ACTTCGACGA GATCGGCCTC ACGGGGTCAC AGATGGGGCT GATCGGGGCG
CTGCTGGTCG CCGGCGGGCT GGTCGCCCAG CCGGCGTGGG GTGTGCTCGC CGACAAAACG
GGCGCGACGC GGGGGATCAT GCTGACTGGG GCGATCGTCT CGGGGATCAG CATCCTGCTG
TTTCCGCTTG CGGCCCACAC CCCCTGGGAG TTCAGTCTCA TGATCGTCGC GACGTTGTTC
GTCTCGAGTT TCCGCGCGCC GATCCTGCCG ATTGCGAACT CGATGGTGCT CTCGAAGGGG
CTGAGCTACG GCCAGATCCG GGCGGCCGGG AGCCTCGCGT TCGGCCTCGG CAGTCTCTTC
ATCGGGTGGG TCGCGACGTT CTTCGGGCTC TCGGTGATCT TCTACCTCTA TGCGGCCGGC
ATGGCGTTTC TCGCCGTACT CGTCAAGGGT CTTGAGAAGC CTCGGGCGGA CATCTCACCG
GACTTGAAAC GGGACGCAAT CAGGCTTTTG GGCAACCAGC GGTTCATCCT GCTGCTGTTC
ATCGCGGTGG TGATCCCCGG TGCCTTCGCC GGAGCCGACG CCTTCCTGTC GGTGTACCTC
CGGGAACTCA CCGGTGGAGA TAGCATTACG GGCGTCGCGT GGCTGGTCAA GACGTTCACC
GAGGCCGTCG TCTTCGTGTG GTTATCCCGG CACAGCTTCG ACAACCGGAC GTTGTTGACA
GTCGGCGGCG TGGTGACAAT GGCCGCGTAT CTCGTGTTGG GGCTCACCCA GGCGGCACCG
ATCGCCGTCG GGGTCATGAT CGTCTCCGGA TCGGGCGTGG CCTTCTTCAT CTACGCCGCG
GTCAACATGG CCCACAAGTA CGCGCCGGTC GCGCTGGCGG CGACCGCCCA GACCCTGTTG
TCCTCGATCG GGATGGGCGT CGGACGGGCA TCGAGCCAAC TCGGCTCGGG GTGGCTGGTG
GACACGGTCG GCGTCCAGTC GCTGTACCTG TTTCTGGCGG CCGCGGCCGC GATCGCGACG
GTCGTCAGCC TCCGGTTTCA CGTCACCCGG CTCCGGAGTG CGATCGGACG CCGGACGTGA
 
Protein sequence
MTDRRLLSVV QKLLDSAGTE YRYHVIYFSY YFALNGMVTF RNAYFDEIGL TGSQMGLIGA 
LLVAGGLVAQ PAWGVLADKT GATRGIMLTG AIVSGISILL FPLAAHTPWE FSLMIVATLF
VSSFRAPILP IANSMVLSKG LSYGQIRAAG SLAFGLGSLF IGWVATFFGL SVIFYLYAAG
MAFLAVLVKG LEKPRADISP DLKRDAIRLL GNQRFILLLF IAVVIPGAFA GADAFLSVYL
RELTGGDSIT GVAWLVKTFT EAVVFVWLSR HSFDNRTLLT VGGVVTMAAY LVLGLTQAAP
IAVGVMIVSG SGVAFFIYAA VNMAHKYAPV ALAATAQTLL SSIGMGVGRA SSQLGSGWLV
DTVGVQSLYL FLAAAAAIAT VVSLRFHVTR LRSAIGRRT