Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1588 |
Symbol | |
ID | 8383867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 1561897 |
End bp | 1563096 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644972650 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003130496 |
Protein GI | 257052663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAGATA GACGACTACT ATCGGTTGTC CAGAAGTTGC TCGACAGTGC AGGCACCGAG TACCGATATC ACGTCATTTA CTTCTCGTAT TACTTCGCGT TGAACGGGAT GGTGACGTTC AGAAACGCCT ACTTCGACGA GATCGGCCTC ACGGGGTCAC AGATGGGGCT GATCGGGGCG CTGCTGGTCG CCGGCGGGCT GGTCGCCCAG CCGGCGTGGG GTGTGCTCGC CGACAAAACG GGCGCGACGC GGGGGATCAT GCTGACTGGG GCGATCGTCT CGGGGATCAG CATCCTGCTG TTTCCGCTTG CGGCCCACAC CCCCTGGGAG TTCAGTCTCA TGATCGTCGC GACGTTGTTC GTCTCGAGTT TCCGCGCGCC GATCCTGCCG ATTGCGAACT CGATGGTGCT CTCGAAGGGG CTGAGCTACG GCCAGATCCG GGCGGCCGGG AGCCTCGCGT TCGGCCTCGG CAGTCTCTTC ATCGGGTGGG TCGCGACGTT CTTCGGGCTC TCGGTGATCT TCTACCTCTA TGCGGCCGGC ATGGCGTTTC TCGCCGTACT CGTCAAGGGT CTTGAGAAGC CTCGGGCGGA CATCTCACCG GACTTGAAAC GGGACGCAAT CAGGCTTTTG GGCAACCAGC GGTTCATCCT GCTGCTGTTC ATCGCGGTGG TGATCCCCGG TGCCTTCGCC GGAGCCGACG CCTTCCTGTC GGTGTACCTC CGGGAACTCA CCGGTGGAGA TAGCATTACG GGCGTCGCGT GGCTGGTCAA GACGTTCACC GAGGCCGTCG TCTTCGTGTG GTTATCCCGG CACAGCTTCG ACAACCGGAC GTTGTTGACA GTCGGCGGCG TGGTGACAAT GGCCGCGTAT CTCGTGTTGG GGCTCACCCA GGCGGCACCG ATCGCCGTCG GGGTCATGAT CGTCTCCGGA TCGGGCGTGG CCTTCTTCAT CTACGCCGCG GTCAACATGG CCCACAAGTA CGCGCCGGTC GCGCTGGCGG CGACCGCCCA GACCCTGTTG TCCTCGATCG GGATGGGCGT CGGACGGGCA TCGAGCCAAC TCGGCTCGGG GTGGCTGGTG GACACGGTCG GCGTCCAGTC GCTGTACCTG TTTCTGGCGG CCGCGGCCGC GATCGCGACG GTCGTCAGCC TCCGGTTTCA CGTCACCCGG CTCCGGAGTG CGATCGGACG CCGGACGTGA
|
Protein sequence | MTDRRLLSVV QKLLDSAGTE YRYHVIYFSY YFALNGMVTF RNAYFDEIGL TGSQMGLIGA LLVAGGLVAQ PAWGVLADKT GATRGIMLTG AIVSGISILL FPLAAHTPWE FSLMIVATLF VSSFRAPILP IANSMVLSKG LSYGQIRAAG SLAFGLGSLF IGWVATFFGL SVIFYLYAAG MAFLAVLVKG LEKPRADISP DLKRDAIRLL GNQRFILLLF IAVVIPGAFA GADAFLSVYL RELTGGDSIT GVAWLVKTFT EAVVFVWLSR HSFDNRTLLT VGGVVTMAAY LVLGLTQAAP IAVGVMIVSG SGVAFFIYAA VNMAHKYAPV ALAATAQTLL SSIGMGVGRA SSQLGSGWLV DTVGVQSLYL FLAAAAAIAT VVSLRFHVTR LRSAIGRRT
|
| |