Gene Huta_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1560 
Symbol 
ID8383839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1531101 
End bp1532171 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID644972622 
Producthypothetical protein 
Protein accessionYP_003130468 
Protein GI257052635 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.202928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCAGAC GGGAGTTTCT CGCGACCGGA TCGGCACTGG GAATCGCCGC GCTCGCCGGC 
TGTGGATCCC TGGAGTCGAG AGCAATCGAC ATCCCGCCGG TCCTGGACAA CCGACCCGAC
GCGATCTACG TTCCGGGCCA CGTCGAGGGG ATGAACATGG TCGGCATCGA GACGACCGGG
GAGTACGACG TCGCGCTTTC ATATAGCTAT CCCCACCGCT TCTGGACGGT CACCGGCACC
GATGTCGAGC GCACGTCGAC CGAGGAGGCG GACTCGGTTC ACCTGATGGC GACAGTCTGG
GACGCAGAGA CGGGGATGAT CCTCCCGGAG GTCGGCGTCG CCATCGAAAT CACGCAGGAT
GGATCGCTCG TCTCGGAGGA GACCGTCTAC GCGATGCTCT CGGGGCCGAT GGGTGTCCAC
CACGGCGCGA ACTTTGCGGG CCTCGATGAA GGCGACTACG AGGTGGCCGT CCGCGTCGGC
GCGACAGCGA GTCGCCCGAC GGGCGCGTTC GCGGGACGGT TCGAGGAGCC AGCGACGGCG
ACGTTCGAAT TCACCTTCGA CCAGGAAACG ATGGGAGAGA TTCGCTTCGA TCGACTCGAC
CGTGGAGGCG AGCGTGGGGC CATCGAGCCG ATGCCGATGG GCGCGGTCCC CACCGGCGTC
GCACCTGCCA CGGACGATCT ACCAGGGAAA GCCGTGAAAG CCATGGCCGG AGACATCCGC
TACGTGGCGA CGGTGGTCGA CCCACCTGCC GGGATCGAGG ACGAGGGGCC GTACCTCGCA
CTCTCACCCC GGACGCGGTA CAACGGCTAC TATCTCTCGC GGATGGGGGT GTCCGTGAGC
CTGGAGGGCA ACGGCGAATC GTCGACCGAG GAGACACTGA CCCGGGCGAT CGACCCCGAG
TTGGGATATC ACTACGGGAC GACGCTGCCA CGCGAGGGCG AGCAAGGCGA GACCGCGAGC
CGCGAGCGTG ACGAGCTGTC GATCACGGTC GAGACGCCAC CACAGGTCGC CAGACACGAG
GGCTACGAGA CGGCGTTTTT CGACGTGCCG ACGACGACGC TGTCGCTGTG A
 
Protein sequence
MFRREFLATG SALGIAALAG CGSLESRAID IPPVLDNRPD AIYVPGHVEG MNMVGIETTG 
EYDVALSYSY PHRFWTVTGT DVERTSTEEA DSVHLMATVW DAETGMILPE VGVAIEITQD
GSLVSEETVY AMLSGPMGVH HGANFAGLDE GDYEVAVRVG ATASRPTGAF AGRFEEPATA
TFEFTFDQET MGEIRFDRLD RGGERGAIEP MPMGAVPTGV APATDDLPGK AVKAMAGDIR
YVATVVDPPA GIEDEGPYLA LSPRTRYNGY YLSRMGVSVS LEGNGESSTE ETLTRAIDPE
LGYHYGTTLP REGEQGETAS RERDELSITV ETPPQVARHE GYETAFFDVP TTTLSL