| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1541 |
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| Symbol | |
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| ID | 8383820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1515752 |
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| End bp | 1517212 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644972603 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003130449 |
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| Protein GI | 257052616 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.127259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCTGG GCGATCGACT CCGTCGAACC CTCCGGGCGT TTCCGGCAGG GCTTGCTCGC
CTGGGGCTTC TCGAGCGCCG GCAGGCCACT GACGCGCTGG AGTTGGCCGC ACCGGTGATG
GTGACCGGCG CGTTGCGCGT GCTGTTGCGG ATGGCCGACT TCATGATGGT CGGGATCGCG
CTCGGCGACG CCGCCATCGC CGGCCTGGAG TTCGGCTTTC AGTACTTCTT CATCGGCTTC
GGGCTCTCGC TGGCGGTCAC GAGCGGGACG ATCAGCGTCG TCTCCCGGCT GAAGGGGGCC
GGCCGGCACG CACGCGCCGA CCTGGCGGTC AAACAGTCGC TGTGGCTGGC CCTGGCGATT
TCCCTCCCCT TGACTGCCAT CGCGTGGCTG TTCGCCGAGC CGCTGGTCGG CCTGTTGACC
GGCGACGCTG TGGTGATCGA CCTCGGTGGC ACGTATCTCC GGCTCGTGAT GCTTGCACTC
CCGTTCCGGT TCTTCAGCAT GGTCGCCTCC CGGGCGCTGG CCGGCGGTGC CGACACGGAA
ACGCCGATGT ACGTCCGGCT GCTGACGCTG CCGATCAACG TCACGCTGAA CGCACTCCTG
ATATTCGGGC TCGGTCCCGC GCCGCGGCTG GGGATCGCCG GTGCGGCCCT CGGGACAGTG
ATCGCCAACG TCGTCGCCGC GATGGCCTTC TTCGCGCTGT TGGTCTCCGG CCGCTTTACC
GTCTCACTTC GGCTCGGTGG CCGACAGGTC GACCCCGGAC TCGCCGCCGA GATCGTCCGC
GTCGCCACGC CGCTTGCGGG GATGCGTTTG TTTCAGACGT TCGGCCGGTT TCCCTTCCTG
TTCATTCTGG GCGTGCTGGG GACACCGGTC GTCGCCGCCT ACGCCATCGG CCGTCGGGTA
ATCATGCTTG CGTTGATGCC TGCCTGGGGG TATTCCACTG CGGCGAGTAC GCTCGTCGGC
CAGAGCCTCG GCCGGGGTGC GGAGGACGAG GCGACCGGCT ACGGCTGGCA GACACTCCGG
ATCGCGCTGG CGACCCAACT CCCGGTGGCG CTCGTCCTCG TGATCGCCGC CCGCCCGATC
GCGGTGGCCT TCGGGACCGA ATACGTCGAT CTGACGGTCA CCTTCATTCG CGTCTTCGGG
CTGGCCGTCG CGGGCTTTTC CGTCTCGCGG ACGATGCGCG GGAGTCTGCG TGGGGCCGGT
GACACGCGCT TCCCGCTGTA CGGGACGACG CTAGGCATCT ACGCCGTTCG ACTCCCGATC
GCCGCCCTGG CGCTGCCGGC GGGCTACGCG ATCACGGTCG CCGGGTCCTC GCTCCCGCTC
GGCGTGGGGC TCGGACCACC TGCCGTGTTC GTCGCGATCG TCGCCGACTT CTACGTCCGG
GCTTCCGTCA ACACCGGACG CTTCGCGGGC GGTGCCTGGC AGGAAGTCGC CCGCCGATCG
GGTGTGGGTG TCGAGGAGTG A
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| Protein sequence | MGLGDRLRRT LRAFPAGLAR LGLLERRQAT DALELAAPVM VTGALRVLLR MADFMMVGIA
LGDAAIAGLE FGFQYFFIGF GLSLAVTSGT ISVVSRLKGA GRHARADLAV KQSLWLALAI
SLPLTAIAWL FAEPLVGLLT GDAVVIDLGG TYLRLVMLAL PFRFFSMVAS RALAGGADTE
TPMYVRLLTL PINVTLNALL IFGLGPAPRL GIAGAALGTV IANVVAAMAF FALLVSGRFT
VSLRLGGRQV DPGLAAEIVR VATPLAGMRL FQTFGRFPFL FILGVLGTPV VAAYAIGRRV
IMLALMPAWG YSTAASTLVG QSLGRGAEDE ATGYGWQTLR IALATQLPVA LVLVIAARPI
AVAFGTEYVD LTVTFIRVFG LAVAGFSVSR TMRGSLRGAG DTRFPLYGTT LGIYAVRLPI
AALALPAGYA ITVAGSSLPL GVGLGPPAVF VAIVADFYVR ASVNTGRFAG GAWQEVARRS
GVGVEE
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