| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1519 |
|---|
| Symbol | |
|---|
| ID | 8383798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1495465 |
|---|
| End bp | 1497090 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644972581 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003130427 |
|---|
| Protein GI | 257052594 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.781722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG GGTTGCTGAT CGGTGCCCGG TTCTGGTACC TGGCGATCTT CGGCTTCTCT
GCGGTCGCCA CGTTCGTCAG TGCGGTCCGA GTCAACCGGA TCGCCGAGGG CGACACCCGA
CGGGGTCTGG TCGCGCTCTT GCTCACCAGC GGCGGGTGGG CACTTGCCCA CGTCGGCTAC
CTGGCGACAG CCGACGAGCA ACTGGGCGTG TTCCTCTACC AGATCGGCCT CGTCGTCGGG
TTGAGTACGA TCGGTGGCTG GCTGTACTTC TGTTCGGCCT TTACCGGCCG GTCGCTCCAC
CGCGACCCAC GGATCCGGCA GATATCGCTC ACCGTCTTCC TCGCGATCGT CGCCGTAAAG
CTCACCAATG ACTTTCACGG CCTGTACTTC TCGAGTGAAG TCGTATCGAC GCCGTTTCCC
CACGTCGCGA TCGCGAGCAC TACGTTACAC TGGACGGTCA TGGCCGGCAG TTACGCGCTG
GCGACGGTCG GATACTTCAT GCTCTACGAG CGCTTCCGAC ACGTCAGCCA CGACTCGCGG
CCGCTGCTCG CCCTCCTCGG GCTGACGGCC CTGCCGGTCG GCTTCGACGT GCTGGGGATG
CTCGTTCCCG GTCTGATGGA GATAACTTAC GAGCCGGTCG GCGTCGCGGC CTTCGCCGTC
GGGCTCTCGT TCGTCTACTT CGAGCGCTTC CGGACGATCA GGCTGGCCGG CGATCGGGAC
GATCCCGTGA TCGTCCTCGA CGCAGACGAT CGGATCCAGG ATTACAACCG CGCGGCCACG
CGACTGGTCC CCGCCCTGGA CGACCGGTCG GTGATCGGCG ACCGCTTTGC TGACGTCGCC
CCGCGGTGTG CGGAGAAAAT CGCGACGGAT GACCCGCTCG TCACGGTCTA CCGGGACGGC
GAGACGCGGT ACTACCGCGT CACCGAACAG CAGTTCTCGG CCTCCCAGTC CTCGCTGGGA
CGGGCCCTCG TCTTCACCGA CGAGACCCAT CGCGAACAGT ACCGCAAGGA GCTCGAACGA
CAAAACGACC GGCTGGATTC CTTCGCCAGC ATGCTCTCTC ATGACCTGCG GAACCCGCTG
AACGTCGCCC AGGGCCGGCT CGAACTTGCT CGTGACGAAC ACGATAGCGA ACACCTCGTG
GCGGCAAACG ACGCTCTCAC CCGCATCGAG ACGCTCATCG AGGACGTCCT CCAGCTCGCC
CGCCAGGGCC AGCCCGTCGA GGAGACCGAC CGCGTCAGCC TCGGGGCGAT CGCCCGGGAC
GCCTGGGGAA TGGTCGAGAC GGCCGAGGCG GAACTGGTCG TCGACTCCGA TCACGATGTC
GAGGCCGATC CGGACCGCCT CCAGCGGCTG TTCGAGAACC TCTTCCGGAA TTCTATCGAA
CACGGCGGCG AGGACGTCAC CGTCACGGTC GGCGCACTCG ATGACACGGA GGGCTTTTTC
GTCGTCGACG ACGGACGCGG TGTCCCCGAA GAAGAACGTG ACCAGGTCTT CGAGTCGGGC
TACAGCACCG CGGAGGACGG CACCGGGTTC GGGCTCTCGA TCGTCGAGCA GATCGTCGCC
GCTCACGAGT GGACGATCGA CCTCGCGGAC GTCGAGACGG GAACGCGATT CGAGATCCGG
ACGTGA
|
|---|
| Protein sequence | MIDGLLIGAR FWYLAIFGFS AVATFVSAVR VNRIAEGDTR RGLVALLLTS GGWALAHVGY
LATADEQLGV FLYQIGLVVG LSTIGGWLYF CSAFTGRSLH RDPRIRQISL TVFLAIVAVK
LTNDFHGLYF SSEVVSTPFP HVAIASTTLH WTVMAGSYAL ATVGYFMLYE RFRHVSHDSR
PLLALLGLTA LPVGFDVLGM LVPGLMEITY EPVGVAAFAV GLSFVYFERF RTIRLAGDRD
DPVIVLDADD RIQDYNRAAT RLVPALDDRS VIGDRFADVA PRCAEKIATD DPLVTVYRDG
ETRYYRVTEQ QFSASQSSLG RALVFTDETH REQYRKELER QNDRLDSFAS MLSHDLRNPL
NVAQGRLELA RDEHDSEHLV AANDALTRIE TLIEDVLQLA RQGQPVEETD RVSLGAIARD
AWGMVETAEA ELVVDSDHDV EADPDRLQRL FENLFRNSIE HGGEDVTVTV GALDDTEGFF
VVDDGRGVPE EERDQVFESG YSTAEDGTGF GLSIVEQIVA AHEWTIDLAD VETGTRFEIR
T
|
|---|
| |