| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1454 |
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| Symbol | |
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| ID | 8383733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1425531 |
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| End bp | 1427702 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644972517 |
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| Product | CRISPR-associated protein, Csh1 family |
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| Protein accession | YP_003130363 |
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| Protein GI | 257052530 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02591] CRISPR-associated protein, Csh1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCGC CCGATGAATT TCGCGAGGAG TACCCACCGG AGCGACTGGA CGACGAACTT
CCCGAAATAC CGATCACGTC GCTCCGGACG ATCCAGTACC TCTACGGAAA GCTCTACACG
CTCGCGACGG CGGGCGGTGG GACGTACGGC CCCTATCTCA CGCCGGACGA AGCGGGTGAT
CTCATCGATA CCGACGACAG CCTGATCGTC GTCCGAGTGG ATCTAAGCGG CGAGGAGCCG
GCGCTCGCCA AGAACGGCAG CGGTCCCGTC GAGGTCAGCC GCTACAGCGC CGACTTGGTC
GAACGCGTCG GCCACTGCAA GTATCCGGCA GCGCGGGGCA TCGACCACAG TGTCACTCAC
CAGGCGGGTC GGAACAGCGA TCCCGAGAAA CTCGCCCGCT ACGCGAAAGA GCGTCTCACG
AAGTGGGCGA CCGATTCTGT CGTTCAGGAA GCGGCAGCCG ATCACGAGGA CGGTTGGATC
GTCGAGGCAC TGGCAACGCT GGGCGAAGAC GACGACGCAC TCGATCGTAT CGAGGACGAC
CTTACCACCA AACTCGGCGG TGAGTCCACG ACCGCGTTGC TCACTGTCCA GGTCAAAACC
GAGCCCGACG GTGGATACCA GTGGCCCGGC GATCTCGACG TGTTCAACGA GGCGATGCGT
CAGCGCAAGC TCTCGAAACT CGTCACCAAG AACAAGGCCG ATGATTCCTC TGGCGAGGCC
ACGGATCTCG TCACCGGGCA GCGAACACGG ACCGTTGGCA CGTCCGAAGA CCCACAGAAC
TACTTCCTGG GCAAGCAACT GGAGAAGTTC CCGGGCCTTG ACATCGAGGA AGCCTGGCGA
ACCCATTCCA TCTCCGAAGA TGCGGCCGTG ACGGTGATGA ACGCCGAGAC GTTCGTCGAG
GCCTGTACGT ATCGAACCTT CGGGGCGAAG GTGTACTATC TGCCGTACTT CTTCGGTCGG
GCTTCGACCG AGGAAATCTA CGAATTGTAC AACCTACTGT ACCAGGCAGC GACAGACGAT
GACGATCTCA CACCTGTCGA GAAGGCCTAC GAGGACTTTC AGGGGAACGA TGACACGTCG
CTCAGGTTCT ACGTCTCGGC AGTCATGCCA CACCAGATGT CTCGCTACGA CGTCTTCGGT
GAGACACTGA ACGGCCGACT GCTCTATCCT CGGGACCTCG CGAGGCATCA CAATCGGATC
GTCAGCGACA CTTCGGCGTT CAACACCGAC ACTGACTGGA GCGCGCCGCT GCCGACCAAC
GAGAACTGGG GGCTGCTGAC AGCAGACGAC GAAGCACTCC ACTCCGTCTC GTCGGGGTGG
TACTTCTACC AGACGTTTGG CGAGCGTGAC GACGACGAAG CCGACGCCGA CGACCCCCGG
ATCGAGGCAC TCGTCAGCGT TCTCGGCGGG GACGCGATCG CCGTTGAGAC GCTCCTCTCG
GAGTACGTCG ACCGGATCAT CGCAGACGAA GACGACGATG AGGTCGAGGG GTTCCCGTCG
TTCCGTGTCG CCTCACAGTT CGCCCAACTG TGTGCTCTGG CGACCGAGAC ACTCGATCTC
CTGACGACCG ACGACCCAGG GAAGCGACCG ATTACGATCG AACCAGACTA CGAGGTAGAC
ACGATGGAAT CACTCGAAGA CATTCAGATC ATCCCAGACG GCGGCCATCC CGCCGCACCG
AAACTCGAAT CGTTCATCGA AGAGACGCCT GCGATCGCGC GACAGTCAGA CGCAGACGAC
GCGCTCGACG AGGCGGACGC CGAGCGACGC CAGTCGGTCA GAAACCAGCG TCGAGGTGCG
TTCATGCTCG GCGCTCTCGT CGGTGAGGTC GGGAGCTATC AGGAGTACAG CGAAGACCGA
TCTACGACAC TTGTCGATCA GTTCCCGGTG AAGTCGATCA CGCAATCCCG GGTGAAGAAA
GTCACACGCG AAGCGATCGG CAAGACGCTC ACCTACACCC GTCAAGAGAA GAAAAGCGGC
GGCAGTTTCC CGGGAACGAA ATTCGAACAC GTCGTCGAGG AACTTCGAAA GACGATCGTC
AACCCGGACC CCGACGACTG GGACATCGAC ACCGAGGACC TCCGGTTCTA CTACGCCCTC
GGCGTGACGT ACGGATTGAA CGACCATCCC GAATGGGATT CCACGACTGA AGACACCGAG
GAGGACATCT AA
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| Protein sequence | MLSPDEFREE YPPERLDDEL PEIPITSLRT IQYLYGKLYT LATAGGGTYG PYLTPDEAGD
LIDTDDSLIV VRVDLSGEEP ALAKNGSGPV EVSRYSADLV ERVGHCKYPA ARGIDHSVTH
QAGRNSDPEK LARYAKERLT KWATDSVVQE AAADHEDGWI VEALATLGED DDALDRIEDD
LTTKLGGEST TALLTVQVKT EPDGGYQWPG DLDVFNEAMR QRKLSKLVTK NKADDSSGEA
TDLVTGQRTR TVGTSEDPQN YFLGKQLEKF PGLDIEEAWR THSISEDAAV TVMNAETFVE
ACTYRTFGAK VYYLPYFFGR ASTEEIYELY NLLYQAATDD DDLTPVEKAY EDFQGNDDTS
LRFYVSAVMP HQMSRYDVFG ETLNGRLLYP RDLARHHNRI VSDTSAFNTD TDWSAPLPTN
ENWGLLTADD EALHSVSSGW YFYQTFGERD DDEADADDPR IEALVSVLGG DAIAVETLLS
EYVDRIIADE DDDEVEGFPS FRVASQFAQL CALATETLDL LTTDDPGKRP ITIEPDYEVD
TMESLEDIQI IPDGGHPAAP KLESFIEETP AIARQSDADD ALDEADAERR QSVRNQRRGA
FMLGALVGEV GSYQEYSEDR STTLVDQFPV KSITQSRVKK VTREAIGKTL TYTRQEKKSG
GSFPGTKFEH VVEELRKTIV NPDPDDWDID TEDLRFYYAL GVTYGLNDHP EWDSTTEDTE
EDI
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