| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1452 |
|---|
| Symbol | |
|---|
| ID | 8383731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1423653 |
|---|
| End bp | 1424447 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644972515 |
|---|
| Product | CRISPR-associated protein Cas5, Hmari subtype |
|---|
| Protein accession | YP_003130361 |
|---|
| Protein GI | 257052528 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGG AATCGTCGAA TGGGAGGACT GGGACGGACG GCAGCGATCT GGATCGTTGT
CTGTCCTTCG AGATCCGGGG TCCGTGGGGA CACTTCCGGC GCGTCGAGGG GAACGTTGTC
AAACAGACCT ACCGGATCGT TCCACGAACG ACCGTCGCCG GGTTGATCGC GGCGGTGCTG
GGCATCGACC GGGACGGGTA TTACGATCTG TTCGGGCCGG AAGTATCCGC GATTGCCATC
CAGCCCGTCG AGGAACTGCG GACGGTCAAC ATGCCGATGA ATACCCTCTC GACGGCAGCG
GGAGACCTCA CTTCGCTCAA TCCACGCGGG AAGATCAGCA TCAAACTCCC CAACCCCACG
AAGCTCCGCC AACAACACAA CTACGAGGTC CTCGTCGACC CTGCCTACAG GATCGACGTT
GCGCTCGCTG ACGACGAGCG GTACGAACAG CTTCGAGAAA CGCTGGCTGC CGGGAAATCT
CATTACGTCC CGAGTCTCGG TCTCTCCGAG TACCTCGCCG AGATCGACTA CCTCGGGGAG
TTCGACGTCA AACCTGGCCC GGCTTCTGGG ACCATCGCCG TCGACTCGGC GGTGCCCGAC
GCGATGGACG ATGTCGTCCT CGATCCCGAA ACGCGCTGCC AGATCGAACA GTCGCCGGCG
TTCATGGCGT CCGACGGTAG CGGACGGACG ACCACGGAGT ACACCACGTA TACATACAAT
CCCGACGCAG AGCCGTTGCA GGTCAGGGAC GTACCAACCT CGCGCGTCGA CGACCGGACC
GTGGTGTTCG TCTGA
|
|---|
| Protein sequence | MDQESSNGRT GTDGSDLDRC LSFEIRGPWG HFRRVEGNVV KQTYRIVPRT TVAGLIAAVL
GIDRDGYYDL FGPEVSAIAI QPVEELRTVN MPMNTLSTAA GDLTSLNPRG KISIKLPNPT
KLRQQHNYEV LVDPAYRIDV ALADDERYEQ LRETLAAGKS HYVPSLGLSE YLAEIDYLGE
FDVKPGPASG TIAVDSAVPD AMDDVVLDPE TRCQIEQSPA FMASDGSGRT TTEYTTYTYN
PDAEPLQVRD VPTSRVDDRT VVFV
|
|---|
| |