| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1442 |
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| Symbol | |
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| ID | 8383721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1410989 |
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| End bp | 1412110 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644972505 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_003130351 |
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| Protein GI | 257052518 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1423] ATP-dependent DNA ligase, homolog of eukaryotic ligase III |
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| TIGRFAM ID | [TIGR01209] RNA ligase, Pab1020 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGG ATCGCGACTG GGCGGCGGTT CTCGGCGTCA GGAGTGCGGA AGTCGATTCG
GTCCTCGCGG CGTTCGAGGA GAGCGTCTTC GAGGGGCGGC GCTACCGCCA CCTCTCGGCT
GCCCGCCACG GGATCGAGCG CGGAACGGCG ATCGTCGACG GGACCGTGAT CCGTGGGTTT
CCGTCGATCC CGCGGACGCT TGTGCTCGAC CCGGGGATCG TCGAGCACTT CGACGGGCGA
GTGACGATCG AGGAGAAACG CAACGGGTAC AACGTCCGCG TCGCCCGGAT CGACGGCGAC
GTCCTGGGGT TCACCCGGAG CGGATACGTC TGTCCGTACA CCACCAGCAA AGTCAGGGAG
CTACTCGACC CCGACTCGTT TTTCGACGCC AATCCCGAGC GCATGCTCTG TGGCGAGTTG
ATCGGCCCGG AGAACCCCTA CACGCCACAC GAGTATCCCG ACGTCGAGTC CGCGGCTTTC
GAGGTGTTCG ACGTCCGCGA TCGAGAGACG GGCCGGCCAT TGGCGGTCGA TCACCGGCGG
GACCTCTGTG CGCGCCACGA CCTGGCGACG GTTCCCGCGT TCGGCGAGTG CGATCCGGTG
GAGGCGGCCG AGGCCGTCCG GGAGGTGATC GCCGACCTGG ACCGGGCAGG CAAAGAAGGG
GTCGTGATGC AGTCGATGGA CGGTACCCGG CAGCTGAAGT ACACGACCTC GGCGACGCAT
CGAGCCGATT TGGAACACGC GTTCTCGCTC CCCTTCGACT ACGGGCGGGA CTTCGTCTTT
CCGCGGGTTC TCCGGGAGGT GTTCCAGGCC GTCGAGCTGG ATCGAACGAG GGGCGAGTCC
CGCCAGCGAG CCCAGGAACT CGGGGAGTCG ATCCTCTTGC CCGCGGTCGA AACCGTCAGG
GCGGTCGAGC GCGGCGAGAC TGTGGGGGAG GAACACACCG TCCGGGACGA CCCTGCCGTG
ATCGAGGCAC TCCTCTCGCA CTTGCAGGAA ATGGGCATCA AGCTCGAAAT CCAGCAGGAT
CGAGACGAGA ACGGCGAGCG CGTCGTCTCG TTCGTGAAAG TATCACAGTC GACCCGTGAC
AACGTCGAAA ACTATCTCGA CGGACAGGTG ATCGACGAGT GA
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| Protein sequence | MDEDRDWAAV LGVRSAEVDS VLAAFEESVF EGRRYRHLSA ARHGIERGTA IVDGTVIRGF
PSIPRTLVLD PGIVEHFDGR VTIEEKRNGY NVRVARIDGD VLGFTRSGYV CPYTTSKVRE
LLDPDSFFDA NPERMLCGEL IGPENPYTPH EYPDVESAAF EVFDVRDRET GRPLAVDHRR
DLCARHDLAT VPAFGECDPV EAAEAVREVI ADLDRAGKEG VVMQSMDGTR QLKYTTSATH
RADLEHAFSL PFDYGRDFVF PRVLREVFQA VELDRTRGES RQRAQELGES ILLPAVETVR
AVERGETVGE EHTVRDDPAV IEALLSHLQE MGIKLEIQQD RDENGERVVS FVKVSQSTRD
NVENYLDGQV IDE
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