Gene Huta_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1374 
Symbol 
ID8383653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1348579 
End bp1349256 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID644972437 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003130283 
Protein GI257052450 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.181966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACGG AGGGCGACGC CGGCAACAGC GCTTCGGAGG GTGACACTGG GTCCGGCACT 
GCGACGGACG CCGCTGGCGA CACCCACGAG GCGATCATGG GTGCGACCTA TCGCGCGCTG 
TGTGAGCATG GCTACGCCGA CCTCACGATG CAGGACATCG CCGACGAGTT CGACAAGAGC 
CGGTCGCTGT TGCACTATCA CTACGACACG AAGGAGGACC TGCTGCTCGC GTTCGTCGAC 
CAGATGGTGG GGTGGATCGG GGATCGATTG GCCGAGACGG AGACCGACGA GCCACTCCCC 
AGGCTGGCGG AGTACGTCGA TCGGTTCGTG ATCGAGCCGG ACGAGTCCGA TCGGCAGACG 
TTCGCCGTCG CAATCGCTGA GCTACGCGTC CAGGCCGTCC ACCACCCCCA GTTCCGCGAG 
AAACTGCAGG CACACTACGA ACGCAACGTC GAAACCGTCG CCGACATCCT CGCCGACGGG 
ATCGAGGCAG GCGTCTTCCG GGACGTCGAT CCCGAGCGCG TGGGCGAAGC CATCTACACC 
GCGATGGTCG GGGCGCGAAC CTACCAGGTC ACCCTCGGTG CCGCGGACGC CACTCGGCGG 
ATGCGAGACG CCATCGCCGA GTTCGTCATC CGGGAGCTGC TCGTCGCGGA CCGGGACGTG 
CCCGAGTACG TCGGGTGA
 
Protein sequence
MGTEGDAGNS ASEGDTGSGT ATDAAGDTHE AIMGATYRAL CEHGYADLTM QDIADEFDKS 
RSLLHYHYDT KEDLLLAFVD QMVGWIGDRL AETETDEPLP RLAEYVDRFV IEPDESDRQT 
FAVAIAELRV QAVHHPQFRE KLQAHYERNV ETVADILADG IEAGVFRDVD PERVGEAIYT 
AMVGARTYQV TLGAADATRR MRDAIAEFVI RELLVADRDV PEYVG