Gene Huta_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1319 
Symbol 
ID8383596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1292949 
End bp1293857 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID644972380 
Productbeta-lactamase domain protein 
Protein accessionYP_003130228 
Protein GI257052395 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATCG GTGACGTCAG ACAGGTAGCG ACTGGGTCGT GTTCGGATCT CTGGTTCGTC 
GACACCGGCA TGTACGCGGT GAGCCAGTAC GGGTCGGTGT ATATCCTCGA CGCCGAGCGG
CCGGCGATCG TCGAGACCGG GATCGGGACC CACCACGACC GGATTCTGGA TGCACTCGAA
GAAGTTGGAC TGGCCCCCGA AGCGATCGAG GTGATCGCGG TCACGCACGT CCACCTCGAT
CACGCGGGCG GGGCCGGATT CCTGGCCGAG GCGTGTCCGA ACGCGTCGAT CGTGGTCCAC
GAGATCGGGG CTCCCCATCT GGCTGCTCCC GAACGTCTCT GGGCGGGAAC CAAACAGGCT
GTCGGCGACC AGATCACCCA CTACGTCGAA CCGGAACCCG TCCCCGAGGC GCGGATCCGG
GAAATCGAAG ACGGCGATCG GATCGACCTC GGCGATCACG CACTTCGCGC CCATCACGCA
CCGGGCCACG CCCCGCATCA GGTGGTGTAC GAGGATCCGG CCAACGACGC CGTCTTCACC
GGTGACGCGG CCGGACTGTA CGTCCCCGAA CGTGGGCGAG TGGAGCCGAC TTCGCCGCCA
CCGGACTTCG ACCTGGAGCA GGCCCTCCGG GACGTCGAGA CGATCCAGGC CATCGACCCG
GAGACGTTGC TGTACTCCCA CTTCGGGCCA GCGATGGCGA CCGGGCAACT GGCTGAGTAC
GCACGGACGC TGAGTGACTG GGTGCAGGCC GTGGCGGCGG CACGGGCGGA ACTCGAAGAC
GACGACGCCG TGATCGAGCA CTTCGCCGGC GAGACGGCCG CCAGCGACAT CTGGGGGCCC
GATAAGGGAC GCGGCGAGAC TGCAATGAAT GTGAGAGGTG TGCTAACATA CCTTGACCGG
ACAGCGTGA
 
Protein sequence
MGIGDVRQVA TGSCSDLWFV DTGMYAVSQY GSVYILDAER PAIVETGIGT HHDRILDALE 
EVGLAPEAIE VIAVTHVHLD HAGGAGFLAE ACPNASIVVH EIGAPHLAAP ERLWAGTKQA
VGDQITHYVE PEPVPEARIR EIEDGDRIDL GDHALRAHHA PGHAPHQVVY EDPANDAVFT
GDAAGLYVPE RGRVEPTSPP PDFDLEQALR DVETIQAIDP ETLLYSHFGP AMATGQLAEY
ARTLSDWVQA VAAARAELED DDAVIEHFAG ETAASDIWGP DKGRGETAMN VRGVLTYLDR
TA